Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2660 ATGGCGAGGCCGTCGTTGTGGTTGAATCTCACTCTGATCTTCGCGATCGCCGTTCTAGCCCCAAGCGGCGATGGCGAACCGCTACACACGAATTCGCGGTGGATAGTCGCGGAGGGCGGCGAGCGCGTGAAGCTCGCTTGCGTGAACTGGGTGGCGCATCTGGACGCCATGGTGGCGGAGGGGCTGAGCAGGCGGCCGGTGGATGCGATATCGAAGGGGATCAAGACGATGGGGTTCAACTGCGTGCGGCTCACTTGGCCGATTGCGCTGGTCACTGACGATTCTCTGGCGTCTCTCACTGTGAGAGAGTCCTTTCAGAAGCTCGGCCTTCTTGACTCCGTCGCCGGAATCCAATCCAACAATCCCTCCATCGTCGATCTTACCCTCATCCAAGCTTATCAGGCGGTGGTGAAAAGCCTGGGAGAGAACGGAGTGATGGTGATCCTGGACAACCACGTGACGATTCCAGGGTGGTGCTGCAGCAACTCCGACGGCAATGGCTTCTTCGGCGACCGCTATTTCGACCCCGACCTCTGGTTGCGGGGCCTCACCGCCATGGCCACCCTCTTCAACGGAGACCCCAATGTGGTGGGTATGAGCCTCAGAAACGAGCTCCGAGGCCCCAGACAAAACGTCAACGATTGGTACAAGTACATGACAAAAGGAGCAGAAGCAGTTCACGCAGCAAACCCAAACGTTCTTGTGATTCTGTCTGGTCTGAACTTCGACAAAGACTTGTCGTTCCTTAGGAATCGACCAGTGAGTCTGTCGTTTAAGGGGAAACTGGTGTTCGAGATGCACTGGTACGCTTTCACCGACGGCGACGCGTGGGTCTCCGGCAACCCGAACGAGGTGTGTGGGCGAGTGTCGGAGAACGTGATGAGGATGTCGGGGTTCTTGTTGGAACGAGGATGGCCATTGTTCGTGAGCGAGTTTGGCGTGGACTTCAGAGGCACCAACGTGAACGACAATAGGTACTTGAGCTGCTTCATAGGTTTAGCAGCTGAGCATGATTTGGATTGGGCTCTGTGGACGGTTGTGGGGAGCTATTATCTGAGGGAAGGAGTTCTGGGAATGAATGAGTACTATGGAGCTCTGGATTGGGATTGGAGTCGTACGAGGAATTCGAGTTTGTTACAGAGGATCTCTGTTCTTCAGTCTCCTTTTCGAGGGCCAGGGACCTCGGCAGGTAGGACACATCAAATAATTTTCCATCCAATGACGGGTCTGTGTGTGTTGAGAAAGACGTTATTTGAACCATTGACTCTGGGACCCTGCTCTGGATCCGACGGCTGGAGATACACCGCCCAGAAGACCCTAACGATCCAGGGCACATACTTCTGCCTCCGAGCCCAGGCTAAAGGGAAGCCAGCCGAACTAGGAACATCATGCAACACTCCTAATTCCAAATGGGACATCATCTCAGACTCTAAGATGCACCTTTCCACAAAACTCTCAGACGGATCTGTTGTCTGTCTAGATGTAGACTCCCACAACCACCTCATCCTCACCAACACCTGTAAGTGCTTGGACAGTGACCGCACGTGCGATCCCGGAAGCCAGTGGTTCAAACTTGTTGACAGTGTGAGGACTCCATTGTCTGCAGAATCATTGGTGTTGCCTGCGAATTCGAAGTTGGATTTACCAGCAACTGGGGATGAGTGGAAATCGGTGAGCTCGATGTAA 1686 0.5415 MARPSLWLNLTLIFAIAVLAPSGDGEPLHTNSRWIVAEGGERVKLACVNWVAHLDAMVAEGLSRRPVDAISKGIKTMGFNCVRLTWPIALVTDDSLASLTVRESFQKLGLLDSVAGIQSNNPSIVDLTLIQAYQAVVKSLGENGVMVILDNHVTIPGWCCSNSDGNGFFGDRYFDPDLWLRGLTAMATLFNGDPNVVGMSLRNELRGPRQNVNDWYKYMTKGAEAVHAANPNVLVILSGLNFDKDLSFLRNRPVSLSFKGKLVFEMHWYAFTDGDAWVSGNPNEVCGRVSENVMRMSGFLLERGWPLFVSEFGVDFRGTNVNDNRYLSCFIGLAAEHDLDWALWTVVGSYYLREGVLGMNEYYGALDWDWSRTRNSSLLQRISVLQSPFRGPGTSAGRTHQIIFHPMTGLCVLRKTLFEPLTLGPCSGSDGWRYTAQKTLTIQGTYFCLRAQAKGKPAELGTSCNTPNSKWDIISDSKMHLSTKLSDGSVVCLDVDSHNHLILTNTCKCLDSDRTCDPGSQWFKLVDSVRTPLSAESLVLPANSKLDLPATGDEWKSVSSM 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2660 561 Pfam Cellulase (glycosyl hydrolase family 5) 66 345 IPR001547 GO:0004553|GO:0071704
Bisa08g2660 561 SUPERFAMILY Ricin B-like lectins 400 524 IPR035992 -
Bisa08g2660 561 CDD RICIN 401 507 IPR000772 -
Bisa08g2660 561 Gene3D - 403 523 - -
Bisa08g2660 561 Gene3D Glycosidases 24 386 - -
Bisa08g2660 561 SUPERFAMILY (Trans)glycosidases 26 376 IPR017853 -
Bisa08g2660 561 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 21 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2660 Bisa-ChrBisa08 61714181 61719252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2660 27 546 Glycoside Hydrolase AT1G13130 58.588 0.0 650
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2660 08 61714181 61719252 Bisa08g2660 08 61714181 61719252 ECH