Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2656 ATGTACAACATTAGTTTTCATTTATGGCTTCTTCTAATTTTTAAATTCCGAGAAAACTCGATAAGGGGTTCTGTGGCTTCTGTGACTGCCTGCAGTGGCAGAGCGGGTCAAGAAGACAACGACAGAGCAAAAATCTGCAACCAGCTTGAAGAAGGCAAATTTGTTAATGATAAGCAGAACTATTACGCATCCGCAGCAGCAACCATGGAGTCTGTCTCTGTGATCTTCATCTGTTTTCTCATTTTTTTGTGTATTCAGAGTGTTGCATCTAAAAATATATCTGAGAATGAGAGAGTTCTACAGCGAGCAAGCTTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACAATTTCTGAAGAAGAATTCTTACAGAGTGCTGAAATCATCTCTCAGCGTCTCCACGTTCATGGATATGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAGGAAAGTCAAGGGTGCTTATCCCGATTCTCTTGGATTCGATGTGATCGATGAATGGGGAAGGATGATGCCTGACCCACAAAGGTGGCCTTCTTCTCAAGGTGGGAAAGGGTTCAAAGAAGTGGCTGATAAAGTACATAGCATGGGTTTGAAGTTCGGAATTCATGTTATGAGAGGGATAAGCACACAAGCTGTTAATGCAAACACCCCCATCCTAGATGCACGGAAGGGAGGAGCATATCAGGAATCTGGAAAAGTGTGGTATGCAAAAGACATAGCAATTCCAGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACAAAGTTGGGAGCTGGAAGAGCCTTCTTGAGGTCCCTGTATGAGCAGTATGCTGCATGGGGTGTTGATTTTGTGAAACATGACTGTGTTTTTGGCGATGACTTGGATTTGAATGAAATAAGCTATGTATCAGAGATTCTCAGGGCACTTGATCGTCCAATTGTATATTCTTTGTCTCCTGGGACGAGTGTGACACCTGCCATGGCTAAGGCTGTCACTGGACTAGTTAACATGTATCGCATAACAGGAGATGACTGGGATACATGGGAAGACGTCGCAGCTCATTTTGATGTAACGAGGGATTTTTCTAAAGCTAATATGATAGGAGCAAAAGGTTTAATGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTGGGATGGCTAACTGATCAAGGTTCAAATGAAGGTCCACACAGGAATTGTCGCCTTAATATAGAAGAGCAAAAAACTCAGTTGACTTTGTGGTCTATGGCAAAGTCACCTCTTATGTATGGAGGGGATGTGCGGAAGCTTGATCAAACTACATATGATCTCATCACAAATCCTACTCTCTTGGAGATTAATTCATTTAGCTCGATTAATATGGAGTTTCCATATATCACAAGCTCAAAAAATATGAAGATTCAAGAGCAGGATGTTGCTGTGCAAATGAAAGGATCTAAGAGATATACACAAACATCATACACAAATTCAATTCGTCTCACCGGCTGTACTGAGTCAAAGGCAGTTGGTTGGTCAATCAAAAGTCTTAACCAAGATGTTGAAAGAATATGTTGGAAAAGGAGTTTAGGAAACAAGCATCAGACACCTTTCTGCGTGCACAAGAGAGAAGTTCGTGTGGCATTAGAAGAGAGTATGTTACCAGAAGACTATAAAGGGAAACATCATTTAGTTGCAGCAAACAGAATGAAACTTTGCCTGGCTGCTTCTCCAGAAAGAAAGCTTACTTCTAAAGAATCCAAGAGAGGTGCATTTATTCCTTGCAGAAGGGATACAAATCAGATGTGGGAATTAAACCCAAATGGCACCCTGGTAAATAGTTATTCCAGCCTCTGTGCAACTGTAGATTCTTCCAAAGCTGAAACTGATTCTCATGGTATTCGCTCTTGGATTGCAAAAGGAAGAAAAGGAGAAATCTACATTGCTTTCTTCAATCTAAATGCATGGAAGACGGTGATATCTGCAAGGACATCTGACCTGGCTAGGGTTTTTCCTGGGAGAGACTACAATTCGTGTAAAGCATGGGAAGTGTGGAGTAAAAAGTACGTAAACATAAGACACGGAAGGTTATCATCTGTAGTTGAAAAGCATGGATGTGCACTATTTGTCCTGAATTGCAACTAG 2133 0.4154 MYNISFHLWLLLIFKFRENSIRGSVASVTACSGRAGQEDNDRAKICNQLEEGKFVNDKQNYYASAAATMESVSVIFICFLIFLCIQSVASKNISENERVLQRASFPPRGWNSYDSFCWTISEEEFLQSAEIISQRLHVHGYEYVVVDYLWYRRKVKGAYPDSLGFDVIDEWGRMMPDPQRWPSSQGGKGFKEVADKVHSMGLKFGIHVMRGISTQAVNANTPILDARKGGAYQESGKVWYAKDIAIPERACAWMPHGFMSVNTKLGAGRAFLRSLYEQYAAWGVDFVKHDCVFGDDLDLNEISYVSEILRALDRPIVYSLSPGTSVTPAMAKAVTGLVNMYRITGDDWDTWEDVAAHFDVTRDFSKANMIGAKGLMGNSWPDLDMLPLGWLTDQGSNEGPHRNCRLNIEEQKTQLTLWSMAKSPLMYGGDVRKLDQTTYDLITNPTLLEINSFSSINMEFPYITSSKNMKIQEQDVAVQMKGSKRYTQTSYTNSIRLTGCTESKAVGWSIKSLNQDVERICWKRSLGNKHQTPFCVHKREVRVALEESMLPEDYKGKHHLVAANRMKLCLAASPERKLTSKESKRGAFIPCRRDTNQMWELNPNGTLVNSYSSLCATVDSSKAETDSHGIRSWIAKGRKGEIYIAFFNLNAWKTVISARTSDLARVFPGRDYNSCKAWEVWSKKYVNIRHGRLSSVVEKHGCALFVLNCN 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2656 710 CDD RICIN 578 621 IPR000772 -
Bisa08g2656 710 PRINTS Glycosyl hydrolase family 27 signature 409 430 IPR002241 GO:0004553|GO:0005975
Bisa08g2656 710 PRINTS Glycosyl hydrolase family 27 signature 100 119 IPR002241 GO:0004553|GO:0005975
Bisa08g2656 710 PRINTS Glycosyl hydrolase family 27 signature 194 215 IPR002241 GO:0004553|GO:0005975
Bisa08g2656 710 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 74 709 IPR002241 GO:0004553|GO:0005975
Bisa08g2656 710 Pfam Alpha galactosidase A 277 451 IPR002241 GO:0004553|GO:0005975
Bisa08g2656 710 Pfam Alpha galactosidase A 119 214 IPR002241 GO:0004553|GO:0005975
Bisa08g2656 710 SUPERFAMILY Ricin B-like lectins 566 633 IPR035992 -
Bisa08g2656 710 CDD GH27 106 451 IPR002241 GO:0004553|GO:0005975
Bisa08g2656 710 SUPERFAMILY Glycosyl hydrolase domain 627 708 - -
Bisa08g2656 710 Gene3D - 622 709 IPR013780 -
Bisa08g2656 710 Gene3D Aldolase class I 97 454 IPR013785 -
Bisa08g2656 710 Pfam Alpha galactosidase C-terminal beta sandwich domain 629 707 IPR041233 -
Bisa08g2656 710 SUPERFAMILY (Trans)glycosidases 103 451 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2656 Bisa-ChrBisa08 61609949 61619055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2656 64 544 Glycoside Hydrolase AT3G26380 65.696 0.0 661
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2656 08 61609949 61619055 Bisa08g2656 08 61609949 61619055 CCT
Bisa08g2656 08 61609949 61619055 Bisa08g2656 08 61609949 61619055 ECH