Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2622 ATGGGCGGCCGAGGCAGGTCTCGTACTCAGCGAAAGCATTTCCGGCAGAGCAGAGAGAACGTCTGGAAGCGTCCAAAACCTGATCCTGACTCCACCACTACCACTGATAATCCTAATCCTACTTGGACTCCTTTCGCCACTCAGAACTCTGCTTTCGATGAGTACTACAAAGAGCAGGGCATAGTGGCGTCGGAAGAGTGGGATGCATTCGTTGGAGCTCTCAGAACTCCATTGCCTGCGAGCTTTAGAATTAATGCTTGTAGCCAATTTTCTGCAGACCTTCGGTCGCAATTGGAAAATGATTTTGTGCAAACTCTTCGGAATGAGGTTGTGGAAGGGGATGAGGCAGAGGCCATTAGACCTTTGCCTTGGTATCCTGAGAATCTTGCTTGGCATTCAAACTTCTCCCGGATGCAGCTGAGAAAGAACCAAACACTTGAGAGGTTCCATGAATTCTTAAAGCTAGAAAATGAAATTGGAAATATTACAAGACAAGAAGCTGTCAGCATGGTGCCTCCCCTTTTCTTGAATGTACAGCCAAATCATTTTGTACTTGATATGTGTGCAGCACCAGGTTCGAAAACCTTCCAATTGCTTGAGATCATACACCAATCAGCTAAAGCAGGATCGCTACCTGATGGAATGGTTATAGCAAATGATCTTGACGTTCAAAGATGTAATCTTCTCATCCACCAAACAAAACGGATGTGCACAGCCAACCTAATTGTCACTAATCATGAAGCTCAGAACTTCCCAGGTTGTCGTTTAATCAGAAATCATGAAACATTGGAACCAGAAGAGCAAATTGGCCAACTTTTATTTGATTGTGTTCTGTGTGATGTCCCATGCAGTGGAGATGGAACCCTCCGCAAAGCACCTGATCTCTGGAGAAAATGGAACACTGGTATGGGCAATGGGCTTCATAGCCTACAAGTTCTAATAGCTACACGAGGTTTATCTTTACTTAAAGTTGGAGGAAGAATGGTATATTCAACCTGCTCAATGAATCCAATTGAGAATGAAGCTGTGGTTGCAGAGATTTTGCGGAGGTCTGGAGGTTCTGTTGAACTTGTTGATGTCTCTAGTGAGCGTTCTCAGCTTCTTCGCCGGCCAGGTCTCAAGAGATGGAAGGTACGTGACAGGGGCATGTGGTTGGCCTCCTACAAAGATGTCCCCAAGTTTCGCCAAAATGCAGTTCTTCCCAGTATGTTTCCTTCTGGCAAACAATATCAGGATATTGTTGACAGTAATAATAAGCTGGACGTGGGAGATGATATTGATAAGGGTGCTCATGGAAACGTTGAAGACAGTGCTCAAGCAGCAGAGAATCCTATGTCACATGAGTTTACTGAGGAAGTTTCTGATTTACCACTAGAGAGTTGCATGAGGATAGTACCTCATGATCAAAACACTGGAGCCTTTTTTATCGCTGTTCTAAGGAAGGTTTCTCCTCTTCCAGCAATTACAATTCAGGAAAAACCTAAAAAAGGCATTGATGATAAGCAGAGTGTAGAACCACAAAACCAGGATATTGAGGATTCAAAAGAACTGCAAGTTGATTCGTTAGAAAGTACTTGTGAGGAACTTCTGGAAGAGGTTAATGTAAATGATAACAAACCCAATACAGAAGATTTGGAAGTTACTCCTTCTGCAACAAGTGTAGAACGGGATTCAGAGGAAGCCCAAGAGCCTCTTAAAACAGAAAGCTTAGCAAAGATAACTCCAGGTAAAAGAAAGCTGCAGATTCAAGGAAAGTGGAGAGGCGTTGATCCTGTTTTCTTCTTCAAAGATGAAACCGTTATTAACAGCATAAAGGCATTTTATGGTATTGATGAAAGGTTTCCATTCAATGGTCACCTTGTCACTAGAAACAATGATACAAGCCATGTCAAAAGAATTTACTATGTCTCCAAGTCAGTCAAAGATGTTCTCACGCTGAATTTCTTGGTTGGCCAGCAACTCAAAATAGCATCCATCGGCCTGAAGATGTTTGAAAGACAATCATCAAGAGAAGGAAGCTCGGCACCATGTGCTTTCCGAATATCATCCGAGGGATTGCCCCTTATTCTGCCATACATCACCAAGCAGATTCTGCGTGCCTCTCCCATAGACTTCAAGCATCTTCTGCAGTATAAAGCTATAAAATTTGCAGATTTTGTTGATGCTGAGTTTGGTGAAAAGGCAGCAAACCTAATGCTAGGCTATTGTGTGATAGTTCTGAGCAAAGGGAACAGAGAAGCAGATACAGAGTCCATTCAAGTGGACGAGTCAACCATAGCCATTGGATGTTGGAAGGGTAGGGCAAGTTTGACAGTGATGGTTACTGCAATGGATTGCCGAGAACTGCTTGAAAGACTTTTAGTGCGTCTAGACACAGAAAAGGGCTCCTGCGTACATGAGGACATTCCCTCCAATAATGCAGGCGATGAAGTACAATGCCCGAACGGCATCGAAGATTCGGAAGCTACTGGGAGATAG 2478 0.4354 MGGRGRSRTQRKHFRQSRENVWKRPKPDPDSTTTTDNPNPTWTPFATQNSAFDEYYKEQGIVASEEWDAFVGALRTPLPASFRINACSQFSADLRSQLENDFVQTLRNEVVEGDEAEAIRPLPWYPENLAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLNVQPNHFVLDMCAAPGSKTFQLLEIIHQSAKAGSLPDGMVIANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQNFPGCRLIRNHETLEPEEQIGQLLFDCVLCDVPCSGDGTLRKAPDLWRKWNTGMGNGLHSLQVLIATRGLSLLKVGGRMVYSTCSMNPIENEAVVAEILRRSGGSVELVDVSSERSQLLRRPGLKRWKVRDRGMWLASYKDVPKFRQNAVLPSMFPSGKQYQDIVDSNNKLDVGDDIDKGAHGNVEDSAQAAENPMSHEFTEEVSDLPLESCMRIVPHDQNTGAFFIAVLRKVSPLPAITIQEKPKKGIDDKQSVEPQNQDIEDSKELQVDSLESTCEELLEEVNVNDNKPNTEDLEVTPSATSVERDSEEAQEPLKTESLAKITPGKRKLQIQGKWRGVDPVFFFKDETVINSIKAFYGIDERFPFNGHLVTRNNDTSHVKRIYYVSKSVKDVLTLNFLVGQQLKIASIGLKMFERQSSREGSSAPCAFRISSEGLPLILPYITKQILRASPIDFKHLLQYKAIKFADFVDAEFGEKAANLMLGYCVIVLSKGNREADTESIQVDESTIAIGCWKGRASLTVMVTAMDCRELLERLLVRLDTEKGSCVHEDIPSNNAGDEVQCPNGIEDSEATGR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2622 825 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 47 389 - -
Bisa08g2622 825 PRINTS RNA (C5-cytosine) methyltransferase signature 464 481 IPR023267 GO:0001510
Bisa08g2622 825 PRINTS RNA (C5-cytosine) methyltransferase signature 275 287 IPR023267 GO:0001510
Bisa08g2622 825 PRINTS RNA (C5-cytosine) methyltransferase signature 185 195 IPR023267 GO:0001510
Bisa08g2622 825 PRINTS RNA (C5-cytosine) methyltransferase signature 325 341 IPR023267 GO:0001510
Bisa08g2622 825 MobiDBLite consensus disorder prediction 536 565 - -
Bisa08g2622 825 MobiDBLite consensus disorder prediction 14 30 - -
Bisa08g2622 825 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 49 482 IPR029063 -
Bisa08g2622 825 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 70 482 IPR001678 GO:0008168
Bisa08g2622 825 MobiDBLite consensus disorder prediction 31 45 - -
Bisa08g2622 825 Coils Coil 512 539 - -
Bisa08g2622 825 MobiDBLite consensus disorder prediction 540 555 - -
Bisa08g2622 825 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 9 794 IPR023267 GO:0001510
Bisa08g2622 825 MobiDBLite consensus disorder prediction 1 45 - -
Bisa08g2622 825 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 654 666 IPR023270 GO:0016428
Bisa08g2622 825 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 131 152 IPR023270 GO:0016428
Bisa08g2622 825 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 359 378 IPR023270 GO:0016428
Bisa08g2622 825 Pfam 16S rRNA methyltransferase RsmB/F 175 360 IPR001678 GO:0008168
Bisa08g2622 825 Gene3D Vaccinia Virus protein VP39 46 393 IPR029063 -
Bisa08g2622 825 MobiDBLite consensus disorder prediction 494 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2622 Bisa-ChrBisa08 61122512 61130647 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2622 08 61122512 61130647 Bisa08g2622 08 61122512 61130647 CCT
Bisa08g2622 08 61122512 61130647 Bisa08g2622 08 61122512 61130647 ECH