Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2581 ATGGCAGACAATTCTCCGGAGAGGAAATCAAGCTGTGGATTGTTCAATGCAGTATTCGGACGACGCAATATGGGGCAACGAAGAACAACCCTCACGCCTCCTGCTCCGACCCACATCAACGAAAATGGCAATCCAAAGAGGCGGCGAGGTCCCTCCGATGCAGCCGATAAAGTCGCCATGAAGCCTGTGATTTCACTCACAAACCCGACCCGTGAAATAGTTCGGAATCAGCAACATCCCAATGAACCATCATCGAAAGTCGCGCCTACTACACAGGGTTATGTGAACCAGGGCCGCAAGGTGCCCAAAGAAGCCACTGGAATTTCCGGTGAGCTTGAGAGTATGGTTTCCGATTACCAGAAGTCCAAGGGAAGCAATATGTTTGTTCGGGCTTCCTCCGGCAACGTGATGTTGTATAGTAATTTAGGAAACTTGAGACAAGCAGGAGCAGGAGAAGGAGAAGGAGGAGGGAATGCTAATGCTAATGCTAATGCGAGTGCTTACAATGTAATGGATCACACTCCGAAGACGAAAGACGATGCTCCAATTGGTGATGGTTATAATAATGGAAGATACAGGAACCGTGTGACAGAGAATGTGGCACAGAGAACGAAGGAGAAACCCAAAGAAGAGCAAGGAGGGGGGCCTCTGTGCAGAGCTGTATCTACTAGAATGGATCCGGAGCAGTTGAAGATAATGGGGAATGAGGATTATAAGAACGGAAGATTTGCAGAGGCGTTGGCTCTGTATGATGCAGCCATCTCAATTGACCCGAATAAGGCTTCCTACAGGAGCAACAGAAGTGCAGCATTAACGGCTCTTGGTAGGCTTCTTGAGGCTGTGTTTGAGTGCAGAGAAGCCATTCGAATTGAACCTCATTACCATAGAGCTCATAATCGATTGGGAAATCTGTACCTCAGATTAGGAGAAACAGAAAAGTCGCAGTATCATTACAAACACGCAGGACAAGAGGCAGATCCCGATGAGATTGCTAAAGTGGGAAACGTCCAGGTTCATCTTAATAAGTGCACGGAGGCTCGTAGGGTGCGAGATTGGAATACCCTGAGAAAGGAGAGTAACTCTGCTATATTAGCCGGTGCAAATTCTGCTCCATTGATATTTGCTCTGCAAGCCGAAGCCCTTCTCAAGCTTCGTAAGCATGACGATGCAGATGAAGTAATGTTAAAGGGCCTCAGTTTTGGCGACGATGAGTTGAACAAGTTCTTGGGACCCATTGGTTTCGCAAATCTGTTGGTCACTCGGGCTCAGGTTGATATGGCTGTTGGCAGATTTGATGATGCATTGGAGGAGGCTCAAAGGGCAGGGAAGCTAGACCCAAATAATAAGGAGGCAGGCATGGTGATGAGGAGGGCTCGAGCAGCAGCAGCAGCGAGATCACAAGGAAACGAGCTTTTCAGGGCATCCAGGTTCTCAGAGGCATTGGCTGCATATGCAGGAGGGCTCGAACATGACCCATGTAACTCGGTCTTGTTGTGTAATCGAGCCGCTTGTGGATCCAAATTAGGCCAATTTGAAAGAGCCGTTGAAGACTGCAATGCTGCCCTGGGTTTACGCCCTTCATACACCAAGGCAAGGTTGAGAAGAGCCGATTGCAACGCCAAGTTGGAAAGATGGGAGGCTTCCATTCTAGACTATGAAATATTGTTGAGAGAAACACCGGAAGATGAGGGAATAAAGGAGGCCTTTTCGGAGGTCCAAAAACAGCTCAAGAAACAACGAGGTGGAGAAGTGTAG 1755 0.4832 MADNSPERKSSCGLFNAVFGRRNMGQRRTTLTPPAPTHINENGNPKRRRGPSDAADKVAMKPVISLTNPTREIVRNQQHPNEPSSKVAPTTQGYVNQGRKVPKEATGISGELESMVSDYQKSKGSNMFVRASSGNVMLYSNLGNLRQAGAGEGEGGGNANANANASAYNVMDHTPKTKDDAPIGDGYNNGRYRNRVTENVAQRTKEKPKEEQGGGPLCRAVSTRMDPEQLKIMGNEDYKNGRFAEALALYDAAISIDPNKASYRSNRSAALTALGRLLEAVFECREAIRIEPHYHRAHNRLGNLYLRLGETEKSQYHYKHAGQEADPDEIAKVGNVQVHLNKCTEARRVRDWNTLRKESNSAILAGANSAPLIFALQAEALLKLRKHDDADEVMLKGLSFGDDELNKFLGPIGFANLLVTRAQVDMAVGRFDDALEEAQRAGKLDPNNKEAGMVMRRARAAAAARSQGNELFRASRFSEALAAYAGGLEHDPCNSVLLCNRAACGSKLGQFERAVEDCNAALGLRPSYTKARLRRADCNAKLERWEASILDYEILLRETPEDEGIKEAFSEVQKQLKKQRGGEV 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2581 584 SUPERFAMILY TPR-like 461 579 IPR011990 GO:0005515
Bisa08g2581 584 Gene3D Tetratricopeptide repeat domain 225 581 IPR011990 GO:0005515
Bisa08g2581 584 ProSiteProfiles TPR repeat profile. 415 448 IPR019734 GO:0005515
Bisa08g2581 584 Pfam Tetratricopeptide repeat 507 562 - -
Bisa08g2581 584 Pfam TPR repeat 234 275 - -
Bisa08g2581 584 MobiDBLite consensus disorder prediction 23 39 - -
Bisa08g2581 584 ProSiteProfiles TPR repeat profile. 227 260 IPR019734 GO:0005515
Bisa08g2581 584 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 7 584 IPR044534 -
Bisa08g2581 584 MobiDBLite consensus disorder prediction 201 220 - -
Bisa08g2581 584 SMART tpr_5 495 528 IPR019734 GO:0005515
Bisa08g2581 584 SMART tpr_5 461 494 IPR019734 GO:0005515
Bisa08g2581 584 SMART tpr_5 227 260 IPR019734 GO:0005515
Bisa08g2581 584 SMART tpr_5 415 448 IPR019734 GO:0005515
Bisa08g2581 584 SMART tpr_5 295 329 IPR019734 GO:0005515
Bisa08g2581 584 SMART tpr_5 529 562 IPR019734 GO:0005515
Bisa08g2581 584 SMART tpr_5 261 294 IPR019734 GO:0005515
Bisa08g2581 584 SUPERFAMILY TPR-like 227 451 IPR011990 GO:0005515
Bisa08g2581 584 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2581 Bisa-ChrBisa08 60407529 60409669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2581 227 531 Glycosyltransferase AT3G04240 23.127 1.29e-06 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2581 08 60407529 60409669 Bisa08g2581 08 60407529 60409669 ECH