Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2472 ATGGGACAGGATGCCGAACTGAAGGCGGCGACGACGGCGTATCGGAATGCAAAGGCGGCGGAGAATAGGCAGGAGGAGGCCCGATGGGCGAACGTGATCGGAAACATATTGAAGAACAGAGGAGAGTACGTGGAGGCACTGAAGTGGCTTCGAAGAGACTATGAGGTTTCTCTCAAATATTTGCCTGAGAAGCATTTGCTCCCCACCTGTCAATCTCTCGGCGAGATTTATCTTCGGCTTGAGCGTTTCGGCGATGCTCTGACGTATCAGAAAAAACACTTGGAGCTTGCTAGGGAGACTAATGACCTTGTTGAGCAGCAAAGAGCCAGCACCCAACTTGGTCGTACTTACCATGAATTATTTTCAAGATCAGAACATGACCATCTCTCAATAAGAAATGCAAAAAAGTATTTTAAGTATGCCATGGAGCTAGCGCAGATTCTTAAGGAGGACCCACCGACCACTAGGTCTTCATTTATCAAGGAATATATTGATGCACACAACAATATAGGAATGCTGGAAATGGAACTTGATAACTTGGAAGAGGCTCAGAAAATCCTAACTAGAGGACTAGAGATTTGCAATGAAGAAGAGGTCAATGAATATGATGATGCGCGCAGCAGGCTCCATCATAACCTTGGTAATGTGTATATGGAATTGAGGATGTGGGAAAAAGCCAGGAAAAATATTGAGAAGGACATTCAGATTTGTAATAGAATTGGACACTGTCAAGGCGAAGCAAAGGGCTATATTAATCTAGGCGAAGTACATTACAGGACTCAGAAGTATGATGAAGCACTTTCTTATTATGAGAAGGCACTTGCTCTGGCAAAATCCATGGAAGATGAGGATGCATTGGTTAGGCAAATTGATCAAAATATCAAAACCGTAAATGAAGCTATGAAAGTAATGGATGGATTAAAGAAAGAAGAGCAGAATTTCAAAAAACTTAAAAGATATTTGGCCGCTGCAAGAGGCACACCACATGAGAGGAAATGTTTGCTCCAGCAAAATGAATCTCTTGATCGCCTCCTTGAGAAATCAAGTATGCTCTTTGCATGGGAGAAGCATTGTGAATTTGCAAAGGAGAAGAAAGAAATAGCAAGTGAATTGTGTGATAGTGAAAAGCTGAGTGATTCGTTTCTGGCTGTTGGAGAATCATATCAGAAGCTCAGAAACTTCAATGAAGCAATCAAATGGTACAGAAAGAGTTGGGAAATGTACAAAAAAATAGGAAACTTAGAGGGGCAAGCACTAGTGAAAATTGATATTGGCAATGTTTTGGATTCTGTTCACAATTGGAAAGAAGCACTAGATGCATTTGAAGAGAGCTACAGGATCGCTGTTAAAGCTAACCTTCCTTCTGTACAGCTTTCTGCCCTGGAGAATATGCACTATAGCAATATGATAAGATTTGATGATGAGAACGAGACCAGGAGGTTGAAACTTTTAATTGATAAGCTGAAGAAGTCAATAGATAATGGCCCTGAAACAAAAAATATACCACAATACTGCTGCCCTGAGACTGACACTGAAGCAGATGATTATCTCGTAAATAGTGGGCCTGATTCTCCGAAGACAAAATCTATATCAAAAAACGTATCTGCTGGAGAAGAGTTGGATGATGACATGCCTCTGATGTCACTCTTTCAGTCCAGAAAAAGATCATCTGAAAAAGCAGATTACCTGGAAAGCTTTAGCAGCACTGCCAAGCAAGCTCAGCAGTCAGTTAGAAATTTCCCAAAAACCACTGGTAATCATCAGAAGGCTGTTGGTTATAAACGTGTCCGTGTAATTCTTTCTGATGATGATGAGGAGGAGAATGATAATGAGATGGAGCGCTTAAACAGAAAGTCCCATGATTGCCAGTTAGAAGACTTCGCTACTTCTCATACAACAAATAGAAATGTGGTCACTCCTGCTACTAAAATTCAGGTTGTCTCAGAGTATGGATCCAAATGTGCAATTAATGTTGAAGAAAGCAGTAGTTCTTTCAAATGCCGGAATCCTCATAGAGCCATGAAAACTGCCAGCAATTCTAGATCTTTGAGCAATGATATAATTGCTGAACCTGATATTGCTAGTGGTTCTAAATGTGGGACGAACTCCTCTGGCAAACTCTTGCAGCATGGTGTTGCCTATCCCGTAAGGAAGAATTTTGATCAAGATCAAGATATTCCAGTCAAGATTGAAAATGACCTGATTTACATAGAAGCAAACTCTCTTGTTGCTGGTGATCTGTTGAAGGCTGAAGTTGCATGCTTATATTATCTACAACTTCCTAGAGAGAAAAGATCGGAAGGTTTATTGCCCATTATTCAGCACATAAAATGTGCTGGAAGAGATCTGAAATTTCTGGAAACTGTCGAAAATCTTAAGGAACATCTGGGAGATGACATGGTCGAAGTTTCCATTGATGGATGCGTTCAGAAGCGTTTAATAAAAATTTACGTAGATTGCTGCGAGGAGTTGTCTGAGGTACCAAATCTCAAGGTACTCAAGAAACTTTACAACTTAGAGGTTTCCGATGATGAGATTATTGTGAATGAGTGCGACCTGCAAGATTTGTCAGTAACCCCATTGTTAAACGCACTGCTTTCCCACAAAACATTTGCAATGCTTGACCTCTCTCACAATATGTTAGGAAACGGAACAATGGAGAAACTTAAAAAAGTGTTCGCAGCATCAGGCCAAACTTATGGTGGCTTAACACTGGACCTGCATTGCAATCGGTTCGGTCCAACTGCTTTGTTTCAGATTTGTGAATGCTCAGTCCTAATTGCTCGACTAGAAGTGCTTAACCTTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACTATCTTGGAAAAATGTATAGCCCTCTGTAGCTTGAATATAGAGCGCTGCCATATCACATCCAGAACTATTCAGAAGATAGCCGATGCATTGGACTCTAAATCTGTACTTTCGCAGCTTTGTATAGGTTATAACAACCCTGTATCTGGAAACGCTATTGTTAATCTTCTGGCCAAGCTTTCTACTTTAAAAAGGTTCTCTGAGCTGAATCTGAGCGGTCTGAAATTAGGCAAACCGGTTATTGATTCTCTTGGCCAGCTTGCAGGGACCTTAACCTTATCTGGACTAATGCTTGGAAGCACGGGTATAGGAAATGAAGGGGCGATGCAGTTAGCACGATCACTGTTCAATGGGACTCAAGAACTTGTGAAACTTGACCTATCATATTGTGGGCTTACATCTAATAATTTTTTAAACGCAGGTGCTACTTTATTTTGTTCCATTCTTGAGCTGAACCTCGAAGGAAACCCTATTATGTCAGAGGACAGCAATACTCTATCTTCTCTGCTCATAAACCCACAGTGCTATCTAAAAGTTTTAGTCCTAAGAAACTGTCAACTTGGGCTTGCAGGGGTTCTTCACATAATTGAGGCACTAGCAGAGAACAACTACCTAGAGGAGCTTAATCTAGCCGGTAATGCTGTTCCAATTGAACTTTCTTCTCTACAATACGACTTCTCAGTAAAAAGGTGCTCAGAAAACCTGGAGCAGAAACTAGACAATTGTGAGTTTCGTAAGGTGAGTTTACCCATGGAAGTAGACCATACTGAAGAAGAGGGTCTTAGCACTCTCAACACTAACGACCGTAAGCTTGAAGTTGCTGAAAATGAAGATACTCCAACTAGAGTAGAAGCTGCTGCTTCTGGAAATGATAGTTGTGCTAGTTCATGTCAAAGAAATTCTTCATCTCCCAAGTGCCATCTCATTCAAAAGCTTTCAACCGCTATTTGTCAGGCAAAGCATTTGCAATTCCTTGACCTTAGTGATAATGGTTTCCCTCCACGAGCTGCAGAAACATTCTATAGTTCATGGTCATCTTCTTTACGAACCCATTCGAGCCACAGGCATACTACAGACCGGATTATTCATTTCTCAACCAATGAAAATAAGTGCTGCAGAGTGAAAGCATGCTGCAAGAAAGATTGA 3993 0.4105 MGQDAELKAATTAYRNAKAAENRQEEARWANVIGNILKNRGEYVEALKWLRRDYEVSLKYLPEKHLLPTCQSLGEIYLRLERFGDALTYQKKHLELARETNDLVEQQRASTQLGRTYHELFSRSEHDHLSIRNAKKYFKYAMELAQILKEDPPTTRSSFIKEYIDAHNNIGMLEMELDNLEEAQKILTRGLEICNEEEVNEYDDARSRLHHNLGNVYMELRMWEKARKNIEKDIQICNRIGHCQGEAKGYINLGEVHYRTQKYDEALSYYEKALALAKSMEDEDALVRQIDQNIKTVNEAMKVMDGLKKEEQNFKKLKRYLAAARGTPHERKCLLQQNESLDRLLEKSSMLFAWEKHCEFAKEKKEIASELCDSEKLSDSFLAVGESYQKLRNFNEAIKWYRKSWEMYKKIGNLEGQALVKIDIGNVLDSVHNWKEALDAFEESYRIAVKANLPSVQLSALENMHYSNMIRFDDENETRRLKLLIDKLKKSIDNGPETKNIPQYCCPETDTEADDYLVNSGPDSPKTKSISKNVSAGEELDDDMPLMSLFQSRKRSSEKADYLESFSSTAKQAQQSVRNFPKTTGNHQKAVGYKRVRVILSDDDEEENDNEMERLNRKSHDCQLEDFATSHTTNRNVVTPATKIQVVSEYGSKCAINVEESSSSFKCRNPHRAMKTASNSRSLSNDIIAEPDIASGSKCGTNSSGKLLQHGVAYPVRKNFDQDQDIPVKIENDLIYIEANSLVAGDLLKAEVACLYYLQLPREKRSEGLLPIIQHIKCAGRDLKFLETVENLKEHLGDDMVEVSIDGCVQKRLIKIYVDCCEELSEVPNLKVLKKLYNLEVSDDEIIVNECDLQDLSVTPLLNALLSHKTFAMLDLSHNMLGNGTMEKLKKVFAASGQTYGGLTLDLHCNRFGPTALFQICECSVLIARLEVLNLSGNRLTDACGSYLSTILEKCIALCSLNIERCHITSRTIQKIADALDSKSVLSQLCIGYNNPVSGNAIVNLLAKLSTLKRFSELNLSGLKLGKPVIDSLGQLAGTLTLSGLMLGSTGIGNEGAMQLARSLFNGTQELVKLDLSYCGLTSNNFLNAGATLFCSILELNLEGNPIMSEDSNTLSSLLINPQCYLKVLVLRNCQLGLAGVLHIIEALAENNYLEELNLAGNAVPIELSSLQYDFSVKRCSENLEQKLDNCEFRKVSLPMEVDHTEEEGLSTLNTNDRKLEVAENEDTPTRVEAAASGNDSCASSCQRNSSSPKCHLIQKLSTAICQAKHLQFLDLSDNGFPPRAAETFYSSWSSSLRTHSSHRHTTDRIIHFSTNENKCCRVKACCKKD 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2472 1330 ProSiteProfiles TPR repeat region circular profile. 247 276 - -
Bisa08g2472 1330 MobiDBLite consensus disorder prediction 1206 1234 - -
Bisa08g2472 1330 ProSiteProfiles TPR repeat profile. 378 411 IPR019734 GO:0005515
Bisa08g2472 1330 Pfam Tetratricopeptide repeat 208 279 - -
Bisa08g2472 1330 Pfam Tetratricopeptide repeat 383 448 - -
Bisa08g2472 1330 SUPERFAMILY TPR-like 163 447 IPR011990 GO:0005515
Bisa08g2472 1330 Gene3D Ribonuclease Inhibitor 820 1247 IPR032675 -
Bisa08g2472 1330 FunFam Protein TONSOKU 820 1192 - -
Bisa08g2472 1330 Gene3D Tetratricopeptide repeat domain 3 321 IPR011990 GO:0005515
Bisa08g2472 1330 PANTHER PROTEIN TONSOKU 3 1330 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Bisa08g2472 1330 MobiDBLite consensus disorder prediction 519 538 - -
Bisa08g2472 1330 Coils Coil 307 327 - -
Bisa08g2472 1330 SMART tpr_5 418 451 IPR019734 GO:0005515
Bisa08g2472 1330 SMART tpr_5 164 197 IPR019734 GO:0005515
Bisa08g2472 1330 SMART tpr_5 67 100 IPR019734 GO:0005515
Bisa08g2472 1330 SMART tpr_5 27 60 IPR019734 GO:0005515
Bisa08g2472 1330 SMART tpr_5 207 240 IPR019734 GO:0005515
Bisa08g2472 1330 SMART tpr_5 247 280 IPR019734 GO:0005515
Bisa08g2472 1330 SMART tpr_5 378 411 IPR019734 GO:0005515
Bisa08g2472 1330 SUPERFAMILY RNI-like 838 1293 - -
Bisa08g2472 1330 FunFam Protein TONSOKU 2 156 - -
Bisa08g2472 1330 ProSiteProfiles TPR repeat profile. 247 280 IPR019734 GO:0005515
Bisa08g2472 1330 Pfam Tetratricopeptide repeat 165 194 IPR019734 GO:0005515
Bisa08g2472 1330 Coils Coil 163 197 - -
Bisa08g2472 1330 MobiDBLite consensus disorder prediction 1206 1228 - -
Bisa08g2472 1330 SUPERFAMILY TPR-like 17 199 IPR011990 GO:0005515
Bisa08g2472 1330 SMART LRR_RI_2 1094 1121 - -
Bisa08g2472 1330 SMART LRR_RI_2 1039 1066 - -
Bisa08g2472 1330 SMART LRR_RI_2 1123 1150 - -
Bisa08g2472 1330 SMART LRR_RI_2 868 895 - -
Bisa08g2472 1330 SMART LRR_RI_2 927 954 - -
Bisa08g2472 1330 SMART LRR_RI_2 1268 1295 - -
Bisa08g2472 1330 Gene3D Tetratricopeptide repeat domain 322 471 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2472 Bisa-ChrBisa08 58485866 58495327 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2472 08 58485866 58495327 Bisa08g2472 08 58485866 58495327 ECH