Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2434 ATGGCTCTCTCCATGAGGAAATCCGCCACCATCCTCACCCTTCTCAAATCAAAGCCTCTCTTCCTCTTCACGCCTTCGCTTCGTCCAGCTTCTTCGACTTCATCCTCCTCTCTTCTTCATCATCCGAAGGCCTTCTCTCTGCTAAATCTCACAAACCCCATAGGAATTGCAGGTACTCTATCTTCCCACCGATTTGAGTCCACGATAGTGCTACATCATTCTGACTCCATTAACGATGCTCACCAGGTGATAGATTTTCCCGGAGGAACAGTGAAATTCACCCCTGAAATGAGGTTTTTATCTGAATCGCCTGCGGAGAGAACACAGTGCTACCGTGTCCTTGATGACAATGGGCAGCCAATTTTGGACACTAGCTTTGTGAAGGTCAGCGAAGAAGTTGCAGTGAAGATGTATAATGACATGATTACACTTCAAATTATGGACACACTTTTCTTTGAAGCACAAAGGCAAGGAAGAATTTCATTTTATGTGACGACTCTTGGAGAAGAGGCTATCAATGTTGCATCAGCTGCTGCACTTTCCATGAACGACCTTATCTTCCCTCAGTATAGGGAACCAGGAGTACTCTTATGGCGTGGATTCAGTCTGCAAGAATTTGCAAACCAATGTTTTTCTAATAGATATGATTACGGGAAAGGAAGGCAGATGCCAGTCCATTATGGGTCAAACAAGCACAATTACATTACTGTAGCATCAACAGTGGCTGCACAACTTCCCCATGCTGTTGGAGCTGCATATTCCTTAAAGATGGACAAGAAGGATGCATGTGCCGTCACTTATTTCGGTGATGGTGGCTCAAGTGAGGGTGATTTCCATGCTGCTTTAAATTTTGCAGCTGTCATGGAGGCCCCGGTTATCTTCTTTTGTCGGAACAATGGATGGGCTATCAGTACTCCTACTTCAGATCAATTTCGGAGTGATGGAGTTGTTGTGAAAGGACAAGCATATGGAGTGCGTAGTATCCGAGTGGATGGCAATGATGCCCTGGCCATCTATAGTGCTGTTCAAGCCGCACGTGAAATGGCAGTTAGTGAACACAGACCAGTTCTAATTGAGGCCCTAACATATAGAGTGGGACACCACTCCACATCAGATGATTCCACCAAGTATCGTCCTGCCAATGAGATTGAAATATGGAGATTGGCACGAGATCCTGTTTCTAGATTTAGAAAGTGGATTGAAAAGAATGGTTGGTGGAATGACAAGGCTGAGTCAGAGCTTAGGAACAATACGAGACAGAAGCTACTACATGCAATTCAGGTGGCAGAGAAGGTTGATAAACCTCCACTTGCAGACCTATTTACTGATGTTTATGATGTCCCTCCATCTAACCTCCGCGAACAGGAGCAATGGCTGGAAGAGACTAGAAGGAAACACCCACAAGATTACACAGCAAATATGTCTTCTTTCTAG 1434 0.4491 MALSMRKSATILTLLKSKPLFLFTPSLRPASSTSSSSLLHHPKAFSLLNLTNPIGIAGTLSSHRFESTIVLHHSDSINDAHQVIDFPGGTVKFTPEMRFLSESPAERTQCYRVLDDNGQPILDTSFVKVSEEVAVKMYNDMITLQIMDTLFFEAQRQGRISFYVTTLGEEAINVASAAALSMNDLIFPQYREPGVLLWRGFSLQEFANQCFSNRYDYGKGRQMPVHYGSNKHNYITVASTVAAQLPHAVGAAYSLKMDKKDACAVTYFGDGGSSEGDFHAALNFAAVMEAPVIFFCRNNGWAISTPTSDQFRSDGVVVKGQAYGVRSIRVDGNDALAIYSAVQAAREMAVSEHRPVLIEALTYRVGHHSTSDDSTKYRPANEIEIWRLARDPVSRFRKWIEKNGWWNDKAESELRNNTRQKLLHAIQVAEKVDKPPLADLFTDVYDVPPSNLREQEQWLEETRRKHPQDYTANMSSF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2434 477 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 123 470 IPR029061 -
Bisa08g2434 477 CDD TPP_E1_PDC_ADC_BCADC 137 429 - -
Bisa08g2434 477 FunFam 2-oxoisovalerate dehydrogenase subunit alpha 79 476 - -
Bisa08g2434 477 Pfam Dehydrogenase E1 component 141 435 IPR001017 GO:0016624
Bisa08g2434 477 Gene3D - 79 476 - -
Bisa08g2434 477 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 75 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2434 Bisa-ChrBisa08 57943361 57948482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2434 1 314 Acyl Lipid Metabolism Gene Families AT5G09300 65.204 4.80e-145 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2434 08 57943361 57948482 Bisa08g2434 08 57943361 57948482 ECH