LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa08g2311	ATGTTACAGAGCTTTCACAAAGCACTACAATCTTCTTCTCAACCACTCAATCTTCCTACTCAGACACCAACGCCATCATCTCCGTCGCAGTTCCAGCCATTACCCACTTCTCCATCTCTTCCCGTTCTTAAACATCAATGCAGACTGTCACGCAGAGAGCTCACAATCTGCAGCAATTCTTGCTTGCTGCTTCTTCTGGGTGCTCAAGGGCTGCTTCCTCTCACTTCCAGAGCGGAGGAAAACCTCACAAACACAGATCGAAGTGATCGACCTGAAGAGAATTTAGGTGAGGAAAACCTCACAAGCACAACTAAAAGTGATCAACTTGTGGAGAGTTTGCCCGGCAATGCTAGTGATCAACCTGAAGAGAATTTAGCTGAGGAAAACCTCACAAACACAACTAAAAGTGATCAACCTGAAGAGAGTTTGCCCGCCAATGCTAGTGGCTGCACGGAAAGAAAACCCACCAAAACAGTGTTCTTTGACATTTCCATTGATGGTGAACCTGCTGGTCGCATTACCATAGGGCTATATGGAGATGATGTCCCTACAGGAGTTGAAAGATTCAGTAAGATTGTCAGTGGAGCTGCTGGCATTAGCTACAGAAGAAAAGAGTTCATCAAAATCATGCCCAACTACGTCCAACATGGTGGGCTTAGATCCTACGGGGTGGATGCTGAACTTGCAAAGGGGAAAGGAAGCAATTTGGGAAGTGAGAGTCTTGTTGAAGAGTGGGAGGGAACGTATGAGAGATGCCCAGGGACTAAAAACTTGGCTGGGAGTGTTGGCCTTATTGTGAGAGATCCATCAAAGCCCCCTCCCAAGCTGAAGCTGGTTGCCAGAGGAGGGAAGCTAGAGATTGATCAAGAGGAGGTTGGAACTGAACCCAATGGGACTGAGTTTGTCATTGCTACAAGGGATTCACCAGAACTGGATGCATCGGCTCTAGTGATTGGAAGAGTAGTTGGAGGCATGGAAGTCGTGCAGAAGATTGGTCAGGTGAAAACTGTGCAAGAGAACACCAGCTCTCCTTATTTCAGGGTTGCAAAGCTAATAGGAGACAAAAGGGCTGTTGTAGCAGAAAGAGGATTCAACCGCCCCTATTCAAAGGTTGTGGTTACAAACTGTGGTGTATTGGAGTAA	1143	0.4681	MLQSFHKALQSSSQPLNLPTQTPTPSSPSQFQPLPTSPSLPVLKHQCRLSRRELTICSNSCLLLLLGAQGLLPLTSRAEENLTNTDRSDRPEENLGEENLTSTTKSDQLVESLPGNASDQPEENLAEENLTNTTKSDQPEESLPANASGCTERKPTKTVFFDISIDGEPAGRITIGLYGDDVPTGVERFSKIVSGAAGISYRRKEFIKIMPNYVQHGGLRSYGVDAELAKGKGSNLGSESLVEEWEGTYERCPGTKNLAGSVGLIVRDPSKPPPKLKLVARGGKLEIDQEEVGTEPNGTEFVIATRDSPELDASALVIGRVVGGMEVVQKIGQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVVVTNCGVLE	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa08g2311	380	SUPERFAMILY	Cyclophilin-like	155	379	IPR029000	-
	Bisa08g2311	380	MobiDBLite	consensus disorder prediction	80	151	-	-
	Bisa08g2311	380	ProSiteProfiles	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.	160	378	IPR002130	GO:0000413\|GO:0003755
	Bisa08g2311	380	Pfam	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	161	343	IPR002130	GO:0000413\|GO:0003755
	Bisa08g2311	380	Gene3D	-	147	380	IPR029000	-
	Bisa08g2311	380	PANTHER	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC	8	380	IPR044185	-
	Bisa08g2311	380	FunFam	Peptidyl-prolyl cis-trans isomerase B	149	380	-	-
	Bisa08g2311	380	MobiDBLite	consensus disorder prediction	1	25	-	-
	Bisa08g2311	380	MobiDBLite	consensus disorder prediction	97	151	-	-
	Bisa08g2311	380	MobiDBLite	consensus disorder prediction	82	96	-	-
	Bisa08g2311	380	MobiDBLite	consensus disorder prediction	1	40	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa08g2311	Bisa-ChrBisa08	54908165	54910484	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa08g2311	08	54908165	54910484	Bisa08g2311	08	54908165	54910484	ECH