Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2033 ATGCCTTCTGTTCTAGTAATCAAGGTTAAATATGGAGATATCCTCCGGCGCTTTAATGCTAGTGTAAATGAGAATAATCAACTAGACCTTGATGTCGCTCGATTGAGGGCCAAGATACGTTCACTTTTTAATTTACCCACTGATGCCAATTTCATCCTGAGATATGTTGATGAAGATGGTGACTTGGTGACACTAGTGAATGACGATGATTTGACTGATGTGATGAGGCAGAAGCTGAAGTTCTTGAGCATTGATGTACATATTAGCAATGAAACTGGTGGTAAATTCAATGCTAGGTCTCATGGAAATGCAATTCCCATAAGATCTCCTCTAGTCAAGAATGATCCATGCGTGAAATGCAATAATGCTGTTGCTGATGTGTTGAAGTCTTTGCCAGAACCATTACTCACTTCTACTCTCGCTAAATTCATCTCCAAAATGATACAATCCTTTCTAGATTCTGATTCCCAGCCTCAAGTTGCAGATAGTAAGATCTCAGAAAATGGTGTTCCTGAGTGTCCTGTAGCTTCCACAGTTCCTGAAGAAAGAGTTCCACAGGTGGAGGATGAGGATGAAGATGTAACTAGATTTGTAACGATACAAATTTCCCCTGTTGATCACAACCTTCCTTGTGATCTCAATCCATCTCCATTGATAAATGCGAATGATGCACTAGTTTCATCTGCAGTCCCTGATGGTGATGGCAAAGAGAGGGAAATGGATACTTTTTTTGATGATTACATTTGTTCTGTATCCACTAGTTACGCAGCTCCTGTTAACACATCAGTGATGGCTTCTGCAGTAAGTTCTAGTCACACTGAGACCATGGGTGGTATGTTCCATAAGAGTGTATACTGTGAAGGCTGTGGCATCAATATAACAGACTGGCCTCACTATAAATCAAAAGCGAAACAAAACTATCACCTGTGCAACATGTGTTTTCATGGATTTGGCAATGAAACTGATTGTGCGAGAGTGGGCATATCCTCACTACCCTACATGGGTGCCTATGAACTTGTGCAGCCACCTTTTGTGGGTTCTCCAGCATTATCACAATTTTTTCAAGAAGGGGGTATTTCGAAGCATGTGGGGCCCATGCTAGATAGCCGGTTTAGTTCTGATGTCAATGTAATAGATGGCACAATGATGGCTCCTTGTACTGCGTTTACAAAGATTTGGCGAATGCAAAACAATGGAATTTTAGTGTGGCCTAAGAGAACTCAACTTTTTTGGATTGGAGGACACAGATTTAGCGACTTTAATTCAGTTAATTTAAAGATTCCTACGTATGGTGTGCCTGTGGACGAGGAATTTGACATTGCAGTTGACTTTAAAGCACCTCAGTTGCCTGGTAAATACGTTTCATACTGGAGGATGGCTTCACCAACTGGTGAACTATTTGGTCAACGTGTTTGGGTTCTTATTGAGGTGGATACATTTCTCAATGAGTCAATTAATGATAGCTCTCAAGTTATGAACTTGAAAATGCCCCTTGGTGACAATGGCTTCAAAGGGCCTAAGGCTATAGGTATCAACATTAAACCTACTGTGGATGATGCCTCTCTTCAGTCCTGCAATTCTAATTCTTCCATAGAAACTGAGAAGAAATTTAGTGATAAGCAAGACACAGCGTCTGTTGTTACCTCAAATAAGAAAATATCTTCTGTAGATACATCCTTCTCTCTAGCTGATAAAATTGGACTTCTAGAAGGAGCCCTTCTTCAAGAGCTTGAGGAGATGGGTTTTTGA 1749 0.4065 MPSVLVIKVKYGDILRRFNASVNENNQLDLDVARLRAKIRSLFNLPTDANFILRYVDEDGDLVTLVNDDDLTDVMRQKLKFLSIDVHISNETGGKFNARSHGNAIPIRSPLVKNDPCVKCNNAVADVLKSLPEPLLTSTLAKFISKMIQSFLDSDSQPQVADSKISENGVPECPVASTVPEERVPQVEDEDEDVTRFVTIQISPVDHNLPCDLNPSPLINANDALVSSAVPDGDGKEREMDTFFDDYICSVSTSYAAPVNTSVMASAVSSSHTETMGGMFHKSVYCEGCGINITDWPHYKSKAKQNYHLCNMCFHGFGNETDCARVGISSLPYMGAYELVQPPFVGSPALSQFFQEGGISKHVGPMLDSRFSSDVNVIDGTMMAPCTAFTKIWRMQNNGILVWPKRTQLFWIGGHRFSDFNSVNLKIPTYGVPVDEEFDIAVDFKAPQLPGKYVSYWRMASPTGELFGQRVWVLIEVDTFLNESINDSSQVMNLKMPLGDNGFKGPKAIGINIKPTVDDASLQSCNSNSSIETEKKFSDKQDTASVVTSNKKISSVDTSFSLADKIGLLEGALLQELEEMGF 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2033 582 Pfam PB1 domain 6 77 IPR000270 GO:0005515
Bisa08g2033 582 SUPERFAMILY CAD & PB1 domains 3 77 - -
Bisa08g2033 582 SMART PB1_new 4 89 IPR000270 GO:0005515
Bisa08g2033 582 ProSiteProfiles PB1 domain profile. 4 86 IPR000270 GO:0005515
Bisa08g2033 582 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 5 582 - -
Bisa08g2033 582 CDD NBR1_like 365 478 IPR032350 -
Bisa08g2033 582 Gene3D Immunoglobulins 361 481 IPR013783 -
Bisa08g2033 582 Pfam Ig-like domain from next to BRCA1 gene 376 477 IPR032350 -
Bisa08g2033 582 SUPERFAMILY RING/U-box 278 316 - -
Bisa08g2033 582 Gene3D - 2 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2033 Bisa-ChrBisa08 48794713 48803921 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2033 08 48794713 48803921 Bisa08g2033 08 48794713 48803921 ECH