Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2001 ATGTCATCGACATCGTCGGCGAGGGATCACGGGATCGTACGGCGGATGGCGAGCCTTCCTCGAAGCATCCTGGGTGGATTTTCGAGGGCCATGAGTGACATAGGCTTGGCAGGATCAGGCGGAAGAAGAAGGGTTCGCATTCAACATCCACCGTCCGATTCCCCATTCCATCATCCATCTCAGCCGTCCCCGGAGGAGTGGGCTTTTCTGGACAGCTTCGAGAGCCAATACGGCGACGTACACCCTTTCTTCTACGCGTGTCGTTTTAGGGAAGTTCTGAAGCTAGCAGAACAAGACCAGAAGTTCGTGTTCGTGTACCTCCATTCGCCGGAACACCCATTTACGCGCGTTTTCTGCAACGAAACGCTGCGTTCCGATGTGGTGATTCAGTTTCTTGATGTTAATTTTGTTTGCTGGGCGGGTCTGGCTGATCGAGGAGAAGGATTGCAAATGGTGAATACTCTGCGACCTGCTAGCTTCCCCTTTTGTGCACTCGTGGCTCCTTCTAGTGGTGACGCCATAGCTGTATTGCAGCAGATTGAAGGACCAATTTCAGCAGGAGAGCTAGTGGAGATTCTACAGAGAACAGTGGAAGAGCAAGGATTAGCTTTTGGAAGTGCAAAAGCGAAGCAGCAAGAAAGGATCAGAGCGGATCGTCGACTCAGAGAAGAACAAGATGCTGCATATCTTGCTGCTTTGCAAATAGACAAGGAAAAGGAGAAACTCAGGAATTCACCTTCTGGAGGAAGAGTTGAGAATCAGAAACCAATAGAAGCATCGAACGCGAGAAATTATGAGAAGCTGAGGAACAACTCTGACAGTAAACACAACACTAGAATGACTGAGCCTTCCACTACTGATAAGGGAGTCCCAAAAAGAGGAGGCCAGTCTTCTCAATCTCAGCCCACTCAGATACTGATAAGGTTTCCGAATGGGGAAAGAAGAGAGCAGAGTTTCTCGAGTACGGACAAAATTCAGTCCATTTTTTCATACATCGATTCACTGGGCGTGCCTGGCATTGCAAACTACAGATTGGTTTCAAACTTCCCTAGAAGAGTGTACGGCGTTGATCAGATGAGAATGACTCTCAAAGATGCGGGTTTGTTTCCCAAAGCTAGCCTCTTCTTGGAGCCCATGCCCATCTGA 1146 0.4895 MSSTSSARDHGIVRRMASLPRSILGGFSRAMSDIGLAGSGGRRRVRIQHPPSDSPFHHPSQPSPEEWAFLDSFESQYGDVHPFFYACRFREVLKLAEQDQKFVFVYLHSPEHPFTRVFCNETLRSDVVIQFLDVNFVCWAGLADRGEGLQMVNTLRPASFPFCALVAPSSGDAIAVLQQIEGPISAGELVEILQRTVEEQGLAFGSAKAKQQERIRADRRLREEQDAAYLAALQIDKEKEKLRNSPSGGRVENQKPIEASNARNYEKLRNNSDSKHNTRMTEPSTTDKGVPKRGGQSSQSQPTQILIRFPNGERREQSFSSTDKIQSIFSYIDSLGVPGIANYRLVSNFPRRVYGVDQMRMTLKDAGLFPKASLFLEPMPI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2001 381 Gene3D Glutaredoxin 60 202 - -
Bisa08g2001 381 Gene3D - 302 379 - -
Bisa08g2001 381 MobiDBLite consensus disorder prediction 283 307 - -
Bisa08g2001 381 SMART ubx_3 295 378 IPR001012 GO:0005515
Bisa08g2001 381 MobiDBLite consensus disorder prediction 239 320 - -
Bisa08g2001 381 CDD UAS 89 199 - -
Bisa08g2001 381 PANTHER FAS-ASSOCIATED PROTEIN 6 377 - -
Bisa08g2001 381 SUPERFAMILY Thioredoxin-like 61 202 IPR036249 -
Bisa08g2001 381 MobiDBLite consensus disorder prediction 39 63 - -
Bisa08g2001 381 Coils Coil 207 227 - -
Bisa08g2001 381 Pfam UBX domain 298 377 IPR001012 GO:0005515
Bisa08g2001 381 ProSiteProfiles UBX domain profile. 298 376 IPR001012 GO:0005515
Bisa08g2001 381 SUPERFAMILY Ubiquitin-like 296 378 IPR029071 -
Bisa08g2001 381 MobiDBLite consensus disorder prediction 268 282 - -
Bisa08g2001 381 CDD UBX 305 377 - -
Bisa08g2001 381 SMART 45neu3 68 194 IPR006577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2001 Bisa-ChrBisa08 48073520 48075929 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2001 08 48073520 48075929 Bisa08g2001 08 48073520 48075929 ECH