Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1977 ATGGCTGGACTGGCAGAAGATCACGGTCCTGGGATTTGCGGTACAAAGGAGACTGAGGACAAGAAGAAGCCCGCACAGAAGACTGTGAGCAAGGAGGACGGTGGTCGAGGGGAGAGGGATATGGCACCCACATCCGGCAATTCGATTCACCGGTCGAGTTCAAGGCCACAGCTCGATGTCAGTAAAGCGGAAATTCAAGGAAATGTTGAGGAGAAGTATCCCACTATTTTGTTACCCAACCAGTCTGATGATATATCTCACCTTGCTCTTGACATTGGAGGATCTCTGATAAAATTGGTGTACTTTTCAAGACACGAAAACCAGTTAGTCAATGATAAAAGGAAGAAAAGTATGAAGGAGCGACTGGGAATTTCTAATGTTAACAGGAGAAGCTATCCTATTCTTGGCGGAAGACTTCATTTTGTGAAGTTTGAGACGAGCAAGATTAATGAGTGCTTAGACTTCATTTATTCAAAGCAGCTTCACTGTGGTGGGTTGGAATCACGTTACTCTGATGCTGTGACTAACCGGAATGCCATAATCAAGGCTACTGGAGGTGGAGCCTACAAGTTTGCTGACCTCTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTGGCTGGAGCAAATTTCCTGCTTAAGGCAATTCGACACGAAGCTTTCACGCACATGGAGGGCCAAAAAGAATTTGTTCAAATTGACCCTAATGAGATGTTTCCTTATCTTCTGGTTAATATTGGATCTGGCGTTAGTATGATCAAGGTTGATGGGGATGGGAAATTTGAGAGGGTCAGTGGCACAAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTTTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAAAAAGGAGACAATAGAGCTATTGACATGCTTGTGGGGGATATTTATGGTGGTATGGACTACTCTAAGATTGGCCTATCAGCTTCAATCATTGCTTCAAGTTTTGGGAAGGCTATCTCAGAAAAAAAAGAACTTGAAGATTACAGACCTGAAGATATCTCCCTCTCTCTTCTACGAATGATTTCATACAATATTGGCCAGATATCTTACTTGAATGCTTTGCGATTTGGGCTGAAGCGTATCTTTTTTGGAGGATTTTTTATACGGGGTCACGCCTATACCATGGACACTATTTCTTTTGCAGTTCATTTCTGGTCTAATGGGGCAGCACAAGCAATGTTCTTGCGACATGAAGGTTTCCTGGGAGTTTTAGGTGCATTTATGAGCTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTGGTTGAAAGATTCCCAATGGGTGCCCCATATACAGGAGGAAAGATTCATGGGCCACCACTTGGAGATTTGAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCAGAAGGGAACTGAGATAACTGCACCTGTGCCAATGATTCCACCTGGAACTACTGGGCTTGGGGGTTTTGAAGTTCCTTTGTCGAAAGGAAATTCTCTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTGCCAACTTTGGAGGTTTTTCCATTATTAGCAGACCCTAAAACGTATGAGCCCAACACTATTGATCTCTCAGATCACAGTGAATTAGAATATTGGTTCACCATTTTGTCTGAGCACTTGCCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCCCGTGCATTTTCTGCTCACTTGGCAAGATTGATGGAGGAACCTGCTGCCTATGGGAAGTTAAGCTTGGCAAATCTATTGGAAATGAGGGAAGAGTGCTTGAGGGAATTCCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAGGCTTCACTTGCTGTTCTACCTGACTTGTTAATGGAGCTTGACAGCATGGGTGAGGAAGCAAGACTACTTACTCTAATTGAAGGTGTCCTGGCTGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTTTATCACAAAGGAACTATTATTGAAATTTACAGGATGAGTCGCAATAAAATGCAGAGACCTTGGCGGGTGGATGATTTTGATGTTTTCAAAGAGAGAATGTTAGGGACTGGGGACAGAAGACCCCCTCCACACAGAAGAGCTTTGCTGTTTGTGGATAATTCAGGTGCTGATGTTGTTCTAGGGATGCTTCCCCTAGCAAGGGAGCTCCTTTGTCGTGGAACTGAAGTAGTTTTGGTTGCAAATTCTCTTCCTGCTTTAAATGATGTAACCGCAATGGAGCTTCCCGACATTGTAGCTGAGGCTGCCAAGCACTGTGACATTCTTAGGCGGGCTGCTGAAGCTGGGGGCCTACTTGTGGATGCAATGATTAACACCTCGGACAGTTCTAAACAAAATTCATCTTCAGTTCCATTGATGGTTGTTGAGAATGGGTGTGGGAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTGGCTGCTGCTGCAAAAGACGCCGACTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACAAACCTCAATGCTCGGTTTAAGTGTGATGCTTTGAAGCTTGCAATGGTGAAAAACCAGAGGTTGGCTGAAAAGTTGGTTAAAGGGAGCATATACGACTGTGTTTGCAAATATGAGCCTGCTACTTGA 2724 0.4394 MAGLAEDHGPGICGTKETEDKKKPAQKTVSKEDGGRGERDMAPTSGNSIHRSSSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDISHLALDIGGSLIKLVYFSRHENQLVNDKRKKSMKERLGISNVNRRSYPILGGRLHFVKFETSKINECLDFIYSKQLHCGGLESRYSDAVTNRNAIIKATGGGAYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDPNEMFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRAIDMLVGDIYGGMDYSKIGLSASIIASSFGKAISEKKELEDYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGAAQAMFLRHEGFLGVLGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMIPPGTTGLGGFEVPLSKGNSLRSDASALNVGVLHLVPTLEVFPLLADPKTYEPNTIDLSDHSELEYWFTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLSLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLMELDSMGEEARLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDVFKERMLGTGDRRPPPHRRALLFVDNSGADVVLGMLPLARELLCRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTSDSSKQNSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFKCDALKLAMVKNQRLAEKLVKGSIYDCVCKYEPAT 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1977 907 FunFam Pantothenate kinase 2 543 629 - -
Bisa08g1977 907 NCBIfam type II pantothenate kinase 87 430 IPR004567 GO:0004594|GO:0005524|GO:0015937
Bisa08g1977 907 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 708 905 - -
Bisa08g1977 907 Pfam Damage-control phosphatase ARMT1-like domain 610 892 IPR002791 -
Bisa08g1977 907 FunFam Pantothenate kinase 2 79 239 - -
Bisa08g1977 907 PANTHER PANTOTHENATE KINASE 57 799 IPR004567 GO:0004594|GO:0005524|GO:0015937
Bisa08g1977 907 SUPERFAMILY Actin-like ATPase domain 198 431 IPR043129 -
Bisa08g1977 907 MobiDBLite consensus disorder prediction 45 60 - -
Bisa08g1977 907 Gene3D - 79 239 - -
Bisa08g1977 907 MobiDBLite consensus disorder prediction 12 39 - -
Bisa08g1977 907 PIRSF PanK_long 41 907 IPR015844 GO:0004594|GO:0015937
Bisa08g1977 907 FunFam Pantothenate kinase 1 87 225 - -
Bisa08g1977 907 Gene3D - 544 629 IPR035073 -
Bisa08g1977 907 SUPERFAMILY Actin-like ATPase domain 85 226 IPR043129 -
Bisa08g1977 907 MobiDBLite consensus disorder prediction 1 60 - -
Bisa08g1977 907 FunFam Pantothenate kinase 2 226 411 - -
Bisa08g1977 907 Pfam Fumble 87 429 IPR004567 GO:0004594|GO:0005524|GO:0015937
Bisa08g1977 907 SUPERFAMILY AF1104-like 522 905 IPR036075 -
Bisa08g1977 907 Gene3D - 309 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1977 Bisa-ChrBisa08 47454947 47469598 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1977 08 47454947 47469598 Bisa02g1298 02 22060836 22065151 CCT
Bisa08g1977 08 47454947 47469598 Bisa02g1298 02 22060836 22065151 ECH
Bisa08g1977 08 47454947 47469598 Bisa08g1977 08 47454947 47469598 ECH