Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1946 ATGAAGGGTCTTCCCAGATTCGACTTCGTCCAGTCCTCTCCTGTTTGCAATAAGAGTTCCTCAGACATGGTCCACCGGTTTGAGAATGTGAAAGTGATTATTACGTTGGACTGGTCTTCAATAGTATTTTTTCAAATCAAAATGTCATCTCCAAGCAAGAGAAGAGATATGGATGTAATGAAATTGATGATGAGCGATTATAATGTGGAGACTGTAAATGATGGGCTCAATGAATTCAATGTGGAGTTTCATGGTCCAAAAGAAAGCCTTTATGAAGGTGGAGTCTGGAAAATTCGTGTTGAGCTTCCTGATGCTTATCCATACAAATCCCCTTCTATAGGTTTTTTGAACAAGATATTCCACCCTAATGTTGATGAGCTATCTGGCTCTGTATGCTTGGATGTTATTAACCAATCTTGGAGTCCAATGTTTGATCTTCTGAATGTCTTTGAAGTTTTTCTTCCACAACTCTTGCTTTATCCAAATCCTTCTGATCCTCTCAATGGTGATGCAGCATCATTAATGATGAAGGATCGAAAGTTGTATGATCAAAAAGTTAAAGAGTACTGTGATCGGTATGCAAAGAAGGAAAACATAAGCAACTCAACAGCTGATGAAGAGAGTGGAGATGAGGAGGATATCACTGAAGAGGAAAGTGGATCAAGTGATGATGAAATCCCTGGCCATGCTGATCCTTGA 699 0.3934 MKGLPRFDFVQSSPVCNKSSSDMVHRFENVKVIITLDWSSIVFFQIKMSSPSKRRDMDVMKLMMSDYNVETVNDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFLNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRKLYDQKVKEYCDRYAKKENISNSTADEESGDEEDITEEESGSSDDEIPGHADP 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1946 232 Pfam Ubiquitin-conjugating enzyme 59 189 IPR000608 -
Bisa08g1946 232 SMART ubc_7 51 195 - -
Bisa08g1946 232 SUPERFAMILY UBC-like 51 197 IPR016135 -
Bisa08g1946 232 MobiDBLite consensus disorder prediction 204 221 - -
Bisa08g1946 232 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 76 183 - -
Bisa08g1946 232 MobiDBLite consensus disorder prediction 197 232 - -
Bisa08g1946 232 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 120 136 IPR023313 -
Bisa08g1946 232 FunFam Ubiquitin-conjugating enzyme 5, E2 48 206 - -
Bisa08g1946 232 CDD UBCc 57 190 IPR000608 -
Bisa08g1946 232 Gene3D Ubiquitin Conjugating Enzyme 43 209 IPR016135 -
Bisa08g1946 232 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 47 195 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1946 Bisa-ChrBisa08 46922733 46930669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1946 51 162 Miscellaneous Gene Families AT3G17000 25.000 3.70e-07 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1946 08 46922733 46930669 Bisa08g1946 08 46922733 46930669 ECH