Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1944 ATGGGGGAGAATAAACGAAAGAGAGGACGCCAACCTAAAAACTCTGCTACTGAAACCCTTGATTTCCCTACTACTAGCACTGTGCCTAACAACAACAACCCTTCTACTGTGGATGATGTCTTCTCTGTTGGGAACGTTGAACTAATTGATGCCAAAACCTCTAACCGTCACGGTCACCTGCACCTCCGTGGCCGACCCAAGAAGTCAACTAACAACTCTGACAAGCCTGATAAGCCACCTGTAATTTCTACTGTCAGACGAGTCGCCCGTCCTGTCAACAATGATGGTGATTTTACAGTTCCCGCTGACGTAGGGGGTTCCATGGCAGTGGCGGTGGCCATGGAAACAGATTCATTGTGGGAGAGTGTTTCGGCAAGGGTGGTGCCTGCCATGGACTCTGTTGTTAAGGTATTTTGTGTGCACACTGAACCTAATTTCTCACTGCCGTGGCAGAGGAAAAGGCAGTACAGCTCCAGTAGTAGTGGATTTGTGATTGGCGGGAGCAGGGTGCTCACCAATGCCCACTCAGTGGAGCATTACACCCAAGTCAAGCTCAAGAAACGCGGCTCTGATACCAAGTACTTGGCCACGGTTCTTGCCATTGGGACCGAATGTGACATTGCCATGCTTACTGTTGAAGATGATGAATTCTGGCAAGGAATGTCACCTGTAGAGTTTGGGGATTTGCCCACACTACAAGATGCAGTTACTGTTGTTGGCTACCCAATTGGTGGAGACACTATTTCAGTGACTAGTGGTGTTGTATCTCGCATTGAGATTCTATCATATGTCCATGGTTCCACTGAACTTCTAGGCTTACAGATAGATGCTGCTATAAACTCTGGTAATTCTGGTGGTCCTGCATTTAATGATAAAGGAAATTGTGTCGGAATTGCATTTCAGTCCCTTAAGCATGAAGATGTGGAGAATATAGGTTATGTCATTCCGACACCAGTTATTGTGCATTTCATACATGATTATGAGAAGAATGGAGCATATACAGGATTCCCTATCCTTGGGGTTGAGTGGCAGAAAATGGAAAATCCTGATCTGCGAATGGCAATGGGCATGAGATCTGATCAGAAAGGGGTACGTATTAGAAGAATTGATCCAACTGCTCCAGAATCTAACGTTTTGAAACCATCAGATGTGATCCTTAGTTTTGATGGTGTTGATATTGCGAATGATGGGACAGTTCCATTTCGCCACGGAGAGCGCATTGGTTTTAGTTATCTTATATCCCAGAAATACACTGGGGATAATGCAGTAATCAAAGTATTGCGAAATTCAGAGATTTTCAAATTTGGCATTAAACTTGGTAGTCACAAACGGCTCATTCCAGCGCACAGCAAGGGCAGGCCTCCTTCATATTATATCATTGCAGGATTTGTTTTTACAACTGTGTCAGTGCCATATCTTCGGTCTGAGTATGGAAAGGATTATGAGTATGAAACTCCTGTCAAGCTTTTGGATAAACTACTGTATTCAATGCCGCAATCACCGGATGAGCAACTTGTTGTGGTTTCTCAGGTGCTGGTAGCTGACATAAATATTGGGTATGAAGATATTGTTAACACTCAGGTTCTTGCTTTTAATGGTAAACCTCTACAAAATCTGAGAAGTTTGGCCAGCATGGTAGAGAGGTGCAGTGATGAGTATCTAAAATTTGATCTAGAATACGATCAGATAGTGGTCCTTCGGGCGTCGGCTGCCAAAGCAGCTACCTTGGATATTCTCGCAACACACTGCATTCCGTCAGCAATGTCGGATGATCTCAAGTCATGA 1785 0.4448 MGENKRKRGRQPKNSATETLDFPTTSTVPNNNNPSTVDDVFSVGNVELIDAKTSNRHGHLHLRGRPKKSTNNSDKPDKPPVISTVRRVARPVNNDGDFTVPADVGGSMAVAVAMETDSLWESVSARVVPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGSRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWQGMSPVEFGDLPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVIVHFIHDYEKNGAYTGFPILGVEWQKMENPDLRMAMGMRSDQKGVRIRRIDPTAPESNVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAVIKVLRNSEIFKFGIKLGSHKRLIPAHSKGRPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYETPVKLLDKLLYSMPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGKPLQNLRSLASMVERCSDEYLKFDLEYDQIVVLRASAAKAATLDILATHCIPSAMSDDLKS 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1944 594 SUPERFAMILY PDZ domain-like 362 444 IPR036034 GO:0005515
Bisa08g1944 594 CDD PDZ_serine_protease 337 433 - -
Bisa08g1944 594 Gene3D - 445 594 IPR046449 -
Bisa08g1944 594 Gene3D - 111 217 IPR043504 -
Bisa08g1944 594 MobiDBLite consensus disorder prediction 52 82 - -
Bisa08g1944 594 Pfam PDZ domain 446 591 IPR041517 -
Bisa08g1944 594 Gene3D - 218 329 IPR043504 -
Bisa08g1944 594 MobiDBLite consensus disorder prediction 1 38 - -
Bisa08g1944 594 FunFam Protease Do-like 9 110 217 - -
Bisa08g1944 594 Pfam Trypsin-like peptidase domain 161 298 - -
Bisa08g1944 594 Gene3D - 336 444 IPR036034 GO:0005515
Bisa08g1944 594 SUPERFAMILY Trypsin-like serine proteases 129 331 IPR009003 -
Bisa08g1944 594 FunFam protease Do-like 9 219 329 - -
Bisa08g1944 594 PRINTS HtrA/DegQ protease family signature 232 256 IPR001940 GO:0004252|GO:0006508
Bisa08g1944 594 PRINTS HtrA/DegQ protease family signature 269 286 IPR001940 GO:0004252|GO:0006508
Bisa08g1944 594 PRINTS HtrA/DegQ protease family signature 378 390 IPR001940 GO:0004252|GO:0006508
Bisa08g1944 594 PRINTS HtrA/DegQ protease family signature 190 210 IPR001940 GO:0004252|GO:0006508
Bisa08g1944 594 PRINTS HtrA/DegQ protease family signature 162 174 IPR001940 GO:0004252|GO:0006508
Bisa08g1944 594 PANTHER - 54 592 - -
Bisa08g1944 594 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1944 Bisa-ChrBisa08 46913138 46918429 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1944 08 46913138 46918429 Bisa08g1944 08 46913138 46918429 ECH