Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1928 ATGGAAAAGAAGCGCAAAAGGAAGCAGGTTGAGGGTGATCGAGAATCGAAGCTCAAATCTTCCTTGAAGCCTCGTTCAAAATCAGCGAGAGCCACGAACGGCGCCAAGGACGACCTCAAAGACCCATATCCTAGTCACGCTCGACCTACTCTCGAAGAATGCCGAGCCGTCCGAGACACTCTATTGGCCCTACACGGTTTTCCCCAAGAGTTCGCCAAGTATCGCAGGAAATCGACAAACGATACTGTGAATTCGGAAACGTTCGATGAACGGGGCGGTACAGGGTTACGTGTCAAAGAAGAGAGTGTACTGGACGGTTTGGTTCGAACTGTGCTCTCGCAGAATACTACAGAGGCAAATTCCCAAAGGGCTTTTGCTTCCCTCAAATCAGCCTTTCCTACTTGGCAAGATGTTCTCAATGCTGACTCCAGGGATGTAGAGGATGCCATTCGATGTGGTGGTTTAGCGCCAACTAAGGCTTCTTGTATTAAAAATGTGTTAAGTTGCTTGCTTGAGAGAAGAGGCAAATTATGCTTGGAGTATTTGCGAGACTTGTCCGTAGATGAAATTAAGTCTGAGCTATCTCTTTTCAAAGGAATTGGTCCCAAAACAGTGGCTTGTGTCTTGATGTTCAATCTTCAGCGAGATGATTTTCCTGTGGACACACACATATTTGAGATTGCAAAAACCATTGGGTGGGTACCATCAGTTGCAGACAGAAACAAGACTTATCTCCATCTAAACCAACGGATCCCAAATGAACTTATGTTTGACCTCAACTGTCTTTTGTATACTCATGGTAAGCTCTGTTTTGAATGCACCAGTAAAAGGGCTAACCAGTCAAAAAAGAAACGTTATGATGAATCTTGCCCTTTATTGAAATACTGTGAGGGCTCACTTTGCACATCCAATTCGATCGAAACTACTATGTTTCCTCGGAATCATTTGAGTTGGGTTTTCCTATGCCTCATCGTTCTTTCGACCATCTTCGACCCATCCATGTCCGACCAACAAACCCGTTGGGCTTCCAAGAAAAAACGCATGAGAGAGAAAGTTCGCAAGATGTTTTACCATGCGTATGACAACTACATGACTCATGCATTTCCGCATGATGAGCTAAAGCCTCTAACCAAAACTTTCACAGACTCCCTAAGTGAGCTGGGAAATTTGAAGCTTGAACACTTGCCTCAAGACTACAATGGATCAGCCCTTACCCTTATTGAATCATTGTCTAGCCTTGTTATTATGGGTAATGACACTGAATTCAAGAAGGCAGTGCTCTGGATTTCTGAAAATCTAACATTTGACGTTGATGCACGCATAAATCTTTTTGAGTGCAACATTAGAGTTCTTGGAGGACTTGTCTCTGCTCATCTTCTTGCATCTGATTCTGCGAACAAGTTGTTTCAAGGAGCTTACAAAAATCAGCTGCTAGTTCTGGCTGAAGATTTAGGGAACCGCTTTCTACCAGCATTTGATACCCCCACTGGATTGCCATATGCGTGGATCAACTTAAAGTATGGAGTATTGGAGAATGAGACTACAGAAACAAGCACTTCAGGGTGTGGTTCTCTTATTCTTGAAATGGGTGCTTTATCAAAATTGACTGGTGATCCCAGATATGAAGCAGTAGCTTTACGAGCTCTACGAAAGCTATGGAGCATGCGGAGTTCGTTAAATTTAGTTGGAACTACACTGGATGTTGCGACTGGGGAATGGATTGAGTTTTCAGCCGGAATTGGAGCTGGGGTTGATTCATTCTATGAGTATCTTCTTAAAGCCCATATCCTTTTTGGGAAGGAGGACTTTTGGAGAATGTTTCATTCTGCTTATATTGCTGTGCAGAAATATTTCAGACATGGTCCTTGGTACCATGATGCTGATATGAGGACAGGAAGAGCAACTTATTGGCAACTTACAAGCCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTCATTGGGGATATTGCAGCTTCTAATTCATCTCACCGTGAATTCTTTCATGTGTGGGACAAATTTGGAGTGCTACCGGAGAGGTATTTGCTGGACCATCAGATGGTGCATCCTACTGAAAAATATTATCCCTTGCGCCCTGAATTTGCAGAGTCAACATTCTATTTATATCAAGCAACTAAAGATCCATGGTATATTGAAGTGGGTGAATCAATAATTAATTCCCTTAATTCATACACCAAAGTGGAAGGTGGATTTGCGAGTATCAGGGATGTGAAAACTATGGAGTTGGAAGATCATCAACATAGCTTTTTCCTGGCTGAAATGTGCAAATATTTATATCTTCTATTTGACGATTCATTTTTAAAAAATGGTAATTACATATTTACCACTGAAGGTCATCCCCTTCCAGTACTAAGCGCTTGGCATGAAAGGCTTCCAGAAACTTACATTCCTACTAATTGGACTTATGTGAAGAGTCAACGAGAAGCTCATAGAATCAGTGCCATGTCAATGCAAGTATGTCCAGCTATGACTCTAAATTCGGGGAAACATATCGAGAGTGCATGCCATGTCCCCGATGCTCGCAGTGACCACAGCCACAGGTGTTTCACTGATGAAGATTGTGGAGTTGACGCAACAACATGCAGAAGAAGGTCTTGTAGTATGGCTGGTTATTGTGGGTTATGGCTTTTCATATGA 2655 0.4275 MEKKRKRKQVEGDRESKLKSSLKPRSKSARATNGAKDDLKDPYPSHARPTLEECRAVRDTLLALHGFPQEFAKYRRKSTNDTVNSETFDERGGTGLRVKEESVLDGLVRTVLSQNTTEANSQRAFASLKSAFPTWQDVLNADSRDVEDAIRCGGLAPTKASCIKNVLSCLLERRGKLCLEYLRDLSVDEIKSELSLFKGIGPKTVACVLMFNLQRDDFPVDTHIFEIAKTIGWVPSVADRNKTYLHLNQRIPNELMFDLNCLLYTHGKLCFECTSKRANQSKKKRYDESCPLLKYCEGSLCTSNSIETTMFPRNHLSWVFLCLIVLSTIFDPSMSDQQTRWASKKKRMREKVRKMFYHAYDNYMTHAFPHDELKPLTKTFTDSLSELGNLKLEHLPQDYNGSALTLIESLSSLVIMGNDTEFKKAVLWISENLTFDVDARINLFECNIRVLGGLVSAHLLASDSANKLFQGAYKNQLLVLAEDLGNRFLPAFDTPTGLPYAWINLKYGVLENETTETSTSGCGSLILEMGALSKLTGDPRYEAVALRALRKLWSMRSSLNLVGTTLDVATGEWIEFSAGIGAGVDSFYEYLLKAHILFGKEDFWRMFHSAYIAVQKYFRHGPWYHDADMRTGRATYWQLTSLQAFWPGLQVLIGDIAASNSSHREFFHVWDKFGVLPERYLLDHQMVHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGESIINSLNSYTKVEGGFASIRDVKTMELEDHQHSFFLAEMCKYLYLLFDDSFLKNGNYIFTTEGHPLPVLSAWHERLPETYIPTNWTYVKSQREAHRISAMSMQVCPAMTLNSGKHIESACHVPDARSDHSHRCFTDEDCGVDATTCRRRSCSMAGYCGLWLFI 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1928 884 MobiDBLite consensus disorder prediction 1 47 - -
Bisa08g1928 884 MobiDBLite consensus disorder prediction 1 22 - -
Bisa08g1928 884 MobiDBLite consensus disorder prediction 30 47 - -
Bisa08g1928 884 SUPERFAMILY Seven-hairpin glycosidases 346 802 IPR036026 GO:0004571|GO:0005509|GO:0016020
Bisa08g1928 884 Gene3D Hypothetical protein; domain 2 101 219 - -
Bisa08g1928 884 Pfam HhH-GPD superfamily base excision DNA repair protein 108 251 IPR003265 GO:0006284
Bisa08g1928 884 PRINTS Glycosyl hydrolase family 47 signature 754 774 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bisa08g1928 884 PRINTS Glycosyl hydrolase family 47 signature 490 509 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bisa08g1928 884 PRINTS Glycosyl hydrolase family 47 signature 355 375 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bisa08g1928 884 PRINTS Glycosyl hydrolase family 47 signature 581 598 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bisa08g1928 884 PRINTS Glycosyl hydrolase family 47 signature 440 458 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bisa08g1928 884 PRINTS Glycosyl hydrolase family 47 signature 695 719 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bisa08g1928 884 PRINTS Glycosyl hydrolase family 47 signature 638 654 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bisa08g1928 884 SMART endo3end 112 269 IPR003265 GO:0006284
Bisa08g1928 884 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 319 816 IPR044674 GO:0004571|GO:1904380|GO:1904382
Bisa08g1928 884 SUPERFAMILY DNA-glycosylase 87 297 IPR011257 GO:0003824|GO:0006281
Bisa08g1928 884 CDD ENDO3c 107 267 IPR003265 GO:0006284
Bisa08g1928 884 Gene3D - 337 799 IPR012341 GO:0005975
Bisa08g1928 884 Pfam Glycosyl hydrolase family 47 355 788 IPR001382 GO:0004571|GO:0005509|GO:0016020
Bisa08g1928 884 Gene3D - 220 276 IPR023170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1928 Bisa-ChrBisa08 46421065 46432656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1928 319 881 Glycoside Hydrolase AT1G27520 76.148 0.0 922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1928 08 46421065 46432656 Bisa08g1928 08 46421065 46432656 ECH