Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1915 ATGATTTCTGATTCAATCACTTCCGCTCCTATTCCTTCAGCCGCGAACACTAAGAATTTGGGCAAGAAAAAGAGGACCAACAGGTCCGCGAAATTAAAGCAATGCAAGATTGATGCTCGTCGCGAGCAGTGGCTTTCTCAAGTTTCGGTCAAGAATAAGGGATGCAAGGAAGGAGGCCACTATGGTCATGCGCCATCTATTCCTGTTGGGAAGGACAGCAGACGTTCGTGGGAGAAATTGGGGATGAGGCCTAGAGATGAGGAGAATGACGGATCGATCCACCAAGATTGCTACTTGGAGTCTCCGTCGAATAGTCCCACCAGTATTGATAGCAGCATGTTGGGCAGTAATGATTCTGGGACAAATTTCACTGGGAGTAGCAGTAGTAGCAGCAGTAGCAGCAGTGCCGGGTGCTGCTCCGGGAATGTCACAGAAGAAGAAGGCGATGATGATTGCTTGGATGACTGGGAGGCTGTGGCCGATGCTTTAGCCGCTGATGATAAGCATCAAAATCCGAGTACGGAGATGTCTCCGGCCCATGAACATGTTGTGCAAGCGGTTTCGCCTTGTGAAATGACTCATGAGTCAAATTTAGGAGCGCGAAATTCTAAAACCCAGAGTGATAGATTAGTTGCCCCCTCTGGCAATAGCCGAGCTTGGAGACCTGATGATGCTTTTCGTCCTCAGTGTCTGCCCAATCTGTCTAAGCAGCTCAGTTTACCAAATCCTGACCGGCGCTGTGGAGGAGTCCCATGGGCTTGCCCTGCTGCGCCATCCTCCTGTCCAATATGCTGTGAGGATCTCGATTTGACGGACTCAAGTTTTTTACCCTGCTGGTGTGGATTCCGGCTTTGCCTCTTTTGTCACAAGAGGATTCTTGAGGAGGACGGCCGCTGTCCTGGGTGCAGGAAGCCGTACCAGGGCGAATCTGTTGAGCCAGAGGCAAGCGTCCATGGAGACAGCCTGACTCTTCCTTTGGCGCGCTCGTGTAGCATGATTATAAGGTCTTAA 1011 0.5084 MISDSITSAPIPSAANTKNLGKKKRTNRSAKLKQCKIDARREQWLSQVSVKNKGCKEGGHYGHAPSIPVGKDSRRSWEKLGMRPRDEENDGSIHQDCYLESPSNSPTSIDSSMLGSNDSGTNFTGSSSSSSSSSSAGCCSGNVTEEEGDDDCLDDWEAVADALAADDKHQNPSTEMSPAHEHVVQAVSPCEMTHESNLGARNSKTQSDRLVAPSGNSRAWRPDDAFRPQCLPNLSKQLSLPNPDRRCGGVPWACPAAPSSCPICCEDLDLTDSSFLPCWCGFRLCLFCHKRILEEDGRCPGCRKPYQGESVEPEASVHGDSLTLPLARSCSMIIRS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1915 336 MobiDBLite consensus disorder prediction 96 141 - -
Bisa08g1915 336 MobiDBLite consensus disorder prediction 1 15 - -
Bisa08g1915 336 MobiDBLite consensus disorder prediction 194 213 - -
Bisa08g1915 336 SUPERFAMILY RING/U-box 258 312 - -
Bisa08g1915 336 ProSiteProfiles Zinc finger RING-type profile. 261 303 IPR001841 -
Bisa08g1915 336 MobiDBLite consensus disorder prediction 1 34 - -
Bisa08g1915 336 MobiDBLite consensus disorder prediction 194 218 - -
Bisa08g1915 336 FunFam RING/U-box superfamily protein 254 319 - -
Bisa08g1915 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 319 IPR013083 -
Bisa08g1915 336 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 257 334 IPR039780 GO:0004842|GO:0030014
Bisa08g1915 336 CDD mRING-HC-C4C4_CNOT4 260 304 IPR039515 -
Bisa08g1915 336 MobiDBLite consensus disorder prediction 72 94 - -
Bisa08g1915 336 Pfam RING/Ubox like zinc-binding domain 261 307 - -
Bisa08g1915 336 MobiDBLite consensus disorder prediction 53 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1915 Bisa-ChrBisa08 46057727 46058940 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1915 08 46057727 46058940 Bisa08g1915 08 46057727 46058940 ECH