Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1898 ATGAAGAGAGGCAGAACAGAAAAAATAGATATTTTTGTGTCATTAACCAGGCACAAACCCATTCAGTTTCTGATCATATTTGGACTTTTATATATACTGTTGGTCACGCTGGAAATCCCCTTTGTGTTCAAATCTGGGTTGAGTGCTGTCTCTCAGGAGTTCATGATTCGTCCTCCTAGGCCAGAGAGTGAGGAGGACTTTGAAGAAAGAGATGCCCCAACTCGCCCTCTTGGAATAATTTCTCAAAATACTGACCAACCCATTCAAAGGCAACTAAATGAGAACAATATTATGTCTGGCTTGATCTTTGATAGTGGTACATTTCATTTGTTGGGTAGGAATGGGTCTGCTGAGCTTTATGAGTCAGTAAAGAATGCGTGGGAAGCGGGGAAGAAGACTTGGGAAGAGTTGGAAATGATGAACTTGGGACCTATCACTGAAAAATCTGAGAATCAATCAGAGTCGTGTCCCCTCTCAATTTCTCTATCTGGGTCAGAATTTTTGGCTCGTGGGCAAGTCATGGTCCTTCCTTGTGGACTATCATTGGGGTCCCACATAACTGTGGTCGGAACACCGCAGGCTCCGGGCCTAAATGCCAATCGAGTGCTAGCATCGCAGATTATCATGGAGTTGCAGGGGTTGATGACTGTGGAAGGCGAGGAACCCCCAAGAATTTTGCATTTTAACCCTAGATTGAAGGGAGATTGGAGTGGGAAGCCTGTAATTGAGCAAAACACTTGTTACAGAATGCATTGGGATATGGCTCAGCGTTGTGATGGTTCGAAATCAAATGATGATGAAGAGACTGTTGATGGGCTGGTGAAGTGTGAAAAGTGGGGGCATGATGCTGAAAGTCATGCAGTGGAGTCTATGGCAGCATGGTGGTTAAATAGAGTTATAGGTAGGACGAAGAAGTTAACAGTTGACTGGCCATTCCCATTTGCTGTGAACAAGCTATTTGTCCTTACTCTTAGTGCTGGATTGGAGGGCTATCATGTTGTTGTTGATGGGAGGCATGTGACCTCTTTTTCCTATCGCACAGGTTTTGCTCTTGAGGATGCCACTGGGCTTTCTTTGAGGGGTGATGTTGATGTTCACAATATATTTGCTGCGTCGTTGCCTGCAACACATCCTAGTTTTTCTCCGCATCAGCATCTTTACTGGTCAAGCAGATGGCGTGCTCCCCCACTTCCTGACTTTGGTGTGGAACTGTTCATCGGAGTCATTTCTTCTGGAAACCATTTTGCTGAGAGGATGGCTGTAAGGATGTCATGGATGCAGCACAGCCTCATCAAATCTTTGAGAGTGGTGTGTCGTTTCTTTGTAGCATTGCATTCAAGAAACGAAGTGAATATAGAGTTAAAGAAGGAAGCAGAATTTTTCGGTGATATTGTTCTAGTGCCGTACATGGATAAATATGACCTTGTTGTCTTGAAAACAGCATCCGTATGTGAATATGGGGTTCGCACAGTTTCTGCTAAGTATATCATGAAGTGTGATGATGACACTTTTGTTAGAGCGGATGCTGTTATAGATGAAGCACGGAAAGTTCTGGATGATGGGAGCTTTTATATCGGTAATATTAACCACAACCATAGACCCTTGCGCCATGGAAAATGGGCTGTGACATATGAGGAGTGGCCAGAAGAGGTGTACCCACCCTATGCTAATGGACCAGGTTATATTTTGTCTTCTGACATTGCACGCTACATTGTATACGAATTTGAGAGCCACAAATTAAGGTTGTTTAAAATGGAAGATGTGAGTATGGGTATGTGGGTAAAGCAATTTAATAGCTCAAAACCAGTGACTTATGTACATAGCTTAAGGTTCTGCCAGTTTGGCTGCATAGAAAACTATTACACAGCCCATTACCAATCGCCGAGGCAGATGAAGTGCTTGTGGGACAAATTGCAATCGCAGACAAAGCCTCAGTGCTGCAATGCGAGATGA 1953 0.4383 MKRGRTEKIDIFVSLTRHKPIQFLIIFGLLYILLVTLEIPFVFKSGLSAVSQEFMIRPPRPESEEDFEERDAPTRPLGIISQNTDQPIQRQLNENNIMSGLIFDSGTFHLLGRNGSAELYESVKNAWEAGKKTWEELEMMNLGPITEKSENQSESCPLSISLSGSEFLARGQVMVLPCGLSLGSHITVVGTPQAPGLNANRVLASQIIMELQGLMTVEGEEPPRILHFNPRLKGDWSGKPVIEQNTCYRMHWDMAQRCDGSKSNDDEETVDGLVKCEKWGHDAESHAVESMAAWWLNRVIGRTKKLTVDWPFPFAVNKLFVLTLSAGLEGYHVVVDGRHVTSFSYRTGFALEDATGLSLRGDVDVHNIFAASLPATHPSFSPHQHLYWSSRWRAPPLPDFGVELFIGVISSGNHFAERMAVRMSWMQHSLIKSLRVVCRFFVALHSRNEVNIELKKEAEFFGDIVLVPYMDKYDLVVLKTASVCEYGVRTVSAKYIMKCDDDTFVRADAVIDEARKVLDDGSFYIGNINHNHRPLRHGKWAVTYEEWPEEVYPPYANGPGYILSSDIARYIVYEFESHKLRLFKMEDVSMGMWVKQFNSSKPVTYVHSLRFCQFGCIENYYTAHYQSPRQMKCLWDKLQSQTKPQCCNAR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1898 650 CDD GLECT 176 369 IPR001079 GO:0030246
Bisa08g1898 650 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 340 598 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bisa08g1898 650 MobiDBLite consensus disorder prediction 58 85 - -
Bisa08g1898 650 FunFam Hydroxyproline O-galactosyltransferase GALT2 285 369 - -
Bisa08g1898 650 Pfam Galactosyltransferase 417 597 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bisa08g1898 650 Pfam Galactoside-binding lectin 173 369 IPR001079 GO:0030246
Bisa08g1898 650 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 371 IPR001079 GO:0030246
Bisa08g1898 650 FunFam Hydroxyproline O-galactosyltransferase 395 638 - -
Bisa08g1898 650 MobiDBLite consensus disorder prediction 58 73 - -
Bisa08g1898 650 Gene3D - 172 369 - -
Bisa08g1898 650 SMART Gal_bind_lectin_2 176 370 IPR001079 GO:0030246
Bisa08g1898 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 173 369 IPR013320 -
Bisa08g1898 650 Gene3D - 401 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1898 Bisa-ChrBisa08 45597189 45601248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1898 5 650 Glycosyltransferase AT1G74800 61.480 0.0 842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1898 08 45597189 45601248 Bisa02g1370 02 23435342 23438982 CCT
Bisa08g1898 08 45597189 45601248 Bisa08g1898 08 45597189 45601248 ECH