Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1867 ATGATTATTCTCTTCTTTGTTTTACACTTTCTACCTCTCAAGTCAGCGCTTCTCGGAATTTTCTTGGGCATCCGCTTCCGGGTGGTGACAATGTCGACTCCTGCGAGGAAGAGGCTGATGAGAGATTTTAAGAGACTGCAACAAGACCCACCTGCAGGAATCAGTGGGGCGCCTCAGGATAACAATATAATGCTATGGAATGCTGTAATATTTGGTCCTGATGATACTCCATGGGACGGAGGCACGTTTAAGTTGACTCTCCAATTTTCGGAGGATTATCCAAACAAACCACCAATGGTGCGATTTGTCTCCCGCATGTTTCATCCTAATATTTATGCAGATGGGAGTATATGTTTGGATATTTTACAAAATCAATGGAGTCCTATATATGATGTAGCTGCTATACTTACATCTATACAGTCCCTGCTATGTGATCCCAATCCAAATTCGCCCGCAAACTCAGAAGCTGCTCGGATGTTTAGTGAGAACAAGCGTGACTACAATCGGAAAGTGAGGGAAATTGTGGAGCAGAGCTGGACAGCGGACTAA 549 0.4408 MIILFFVLHFLPLKSALLGIFLGIRFRVVTMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFSEDYPNKPPMVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRDYNRKVREIVEQSWTAD 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1867 182 SMART ubc_7 37 180 - -
Bisa08g1867 182 Pfam Ubiquitin-conjugating enzyme 38 174 IPR000608 -
Bisa08g1867 182 SUPERFAMILY UBC-like 27 180 IPR016135 -
Bisa08g1867 182 Gene3D Ubiquitin Conjugating Enzyme 29 178 IPR016135 -
Bisa08g1867 182 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 34 180 IPR000608 -
Bisa08g1867 182 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 107 122 IPR023313 -
Bisa08g1867 182 FunFam Ubiquitin-conjugating enzyme E2 2 31 178 - -
Bisa08g1867 182 CDD UBCc 37 175 IPR000608 -
Bisa08g1867 182 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 33 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1867 Bisa-ChrBisa08 44856940 44864052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1867 37 150 Miscellaneous Gene Families AT1G17280 31.092 1.87e-15 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1867 08 44856940 44864052 Bisa08g1867 08 44856940 44864052 ECH