Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa08g1769 | ATGTTTAGCCTAAAGAAATCTCCTCTAAAAGTTGTTAAACCAAGTTCTGTTGATCCTGTCTATCCTGTTAAATCGGGGTCTAACCCGTTTGATTCTGATGATGATGAGGCAAAGGAAAACCAAAAACTTAATTCCTTGAGGAGGACTTCTTCAGAAGCTGCCCTAGTTACACCAGAAGTTAACACCAACCCGTTTGATGATGACAATGGTTATAGAAACTCTTCTTCCTCATCTCCTTATGTCCTTCAATCAGCTAACAGAAACAAGTATAGGAATGATTTCCGTGACTCTGGAGGAATAGAAAATCAATCAGTGCAAGAACTAGAGAGTTATGCTGTTTACAAGGCCGAAGAGACTACTAAATCAGTCAAAAATTGCTTGAAAATCGCAGAGGACATAAGAGAGGATGCCACCAAGACCTTAGTCACCCTGCACCAACAGGGTGAGCAAATTACCAGGTCTCACTATGTTGCTGTTGACATCGATCATGATCTTAGTCGGGGTGAAAAGCTTTTGGGAAGTCTTGGTGGCCTCTTCTCCAAGACTTGGAAACCAAAGAAGACGCGCCCAATTACAGGCCCCGTTATTGTTGGAGATGATCAGGTAAGAAGAAAGGGCAGCCACTTGGAGCAGAGAGAGAAGTTGGGATTGACTTCTGCACGCAGAGAGTCGAACAGCCGGCCACCACCTCCTGAGCCAACCAATGCACTTAAAAAAGTTGAGATTGAAAAGGGGAAACAAGATGATGCGCTGTCAAATCTAAGTGACCTCTTGGGAGAGCTGAAAGGTATGGCTGTTGACATGGGATCTGAAATTGAGAGGCAAAAAAATTCGCTGGACCATGTCTACAACGATGTGGATGAGTTGAATTTCCGTGTGAGTGGTGCTAACCAACGTGGTCTTCGTCTACTGGGAAAATAA | 921 | 0.4387 | MFSLKKSPLKVVKPSSVDPVYPVKSGSNPFDSDDDEAKENQKLNSLRRTSSEAALVTPEVNTNPFDDDNGYRNSSSSSPYVLQSANRNKYRNDFRDSGGIENQSVQELESYAVYKAEETTKSVKNCLKIAEDIREDATKTLVTLHQQGEQITRSHYVAVDIDHDLSRGEKLLGSLGGLFSKTWKPKKTRPITGPVIVGDDQVRRKGSHLEQREKLGLTSARRESNSRPPPPEPTNALKKVEIEKGKQDDALSNLSDLLGELKGMAVDMGSEIERQKNSLDHVYNDVDELNFRVSGANQRGLRLLGK | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa08g1769 | 306 | PANTHER | SYNAPTOSOMAL ASSOCIATED PROTEIN | 27 | 306 | - | - | |
| Bisa08g1769 | 306 | MobiDBLite | consensus disorder prediction | 203 | 220 | - | - | |
| Bisa08g1769 | 306 | MobiDBLite | consensus disorder prediction | 29 | 45 | - | - | |
| Bisa08g1769 | 306 | SUPERFAMILY | SNARE fusion complex | 244 | 302 | - | - | |
| Bisa08g1769 | 306 | CDD | SNARE_SNAP25N_23N_29N_SEC9N | 111 | 174 | IPR044766 | GO:0005484|GO:0031201 | |
| Bisa08g1769 | 306 | SUPERFAMILY | SNARE fusion complex | 103 | 173 | - | - | |
| Bisa08g1769 | 306 | SMART | tSNARE_6 | 108 | 175 | IPR000727 | - | |
| Bisa08g1769 | 306 | SMART | tSNARE_6 | 236 | 303 | IPR000727 | - | |
| Bisa08g1769 | 306 | Gene3D | - | 99 | 176 | - | - | |
| Bisa08g1769 | 306 | MobiDBLite | consensus disorder prediction | 46 | 82 | - | - | |
| Bisa08g1769 | 306 | Gene3D | - | 239 | 305 | - | - | |
| Bisa08g1769 | 306 | MobiDBLite | consensus disorder prediction | 203 | 236 | - | - | |
| Bisa08g1769 | 306 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 241 | 303 | IPR000727 | - | |
| Bisa08g1769 | 306 | FunFam | SNAP25 homologous protein SNAP33 | 99 | 176 | - | - | |
| Bisa08g1769 | 306 | CDD | SNARE_Qc | 246 | 299 | - | - | |
| Bisa08g1769 | 306 | MobiDBLite | consensus disorder prediction | 1 | 82 | - | - | |
| Bisa08g1769 | 306 | FunFam | SNAP25 homologous protein SNAP33 | 238 | 305 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa08g1769 | Bisa-ChrBisa08 | 42188171 | 42190742 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bisa08g1769 | 08 | 42188171 | 42190742 | Bisa08g1769 | 08 | 42188171 | 42190742 | ECH |