Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1448 ATGGGCGTGTTACCGTGTCATCTTTGTGATGCGCTAGTGTTTCATTCATTTTCTAAATGCTCAGATGTGCTAGAAACACCAAAAGCTATTGGTCTGTATGAAATTGTGCTGTTTAGTCCTTTGATTTCACCTTTCTATGCTCATTATCTGCTGCTATATGGTTGCCATTCAAGTGCTTCTATATTATTTCCCTTAACTATATATAGTGGACTTGAAATATGGCATATTGAGAATTTTAATCCGGTTCCTGTCCCGAAGTCCTCTTATGGGAAGTTTTTCACGGGGGACTCCTATGTGATCCTGAAGACAACTGCTTCAAAAAGTGGTGCCTTGCGTCATGATATCCATTACTGGCTCGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGTGGACGTGCTGTTCAATACCGTGAAGTGCAGGGTCATGAAACCGAAAAGTTCCTGTCTTACTTTAAACCATGTATTATACCACAGGAAGGTGGTGTTGCCTCTGGTTTTAAGCATGCTGAGGCTGAAGAATATAAGACACGAATGTTTGTGTGCAAAGGAAAACATGTTGTACATGTGAAAGAGGCAAGTTTGACATTACTCCTCTGCTATTGGTGTTTGAGGCTTGTCCCTTTTTCCCGATCTTCACTAAACCATGATGATATTTTTATTCTGGATACGAAGTCCAAAATCTTCCAATTTAATGGTTCAAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTACAATATATTAAGGATACATACCATGATGGGAAATGTGAGGTAGCTGCTATTGAGGATGGAAAGTTGATGGCTGATGCTGAAACTGGAGAATTCTGGGGTTTCTTCGGGGGCTTTGCTCCTCTTCCAAGAAAACCAGCCGGTGATGATGAGCAGCATGTTGATTCTCATCCTACAAAGCTGCTTTGCATTGAAAAGGGGCGAGCTGAACCTATTAAACATGATTCTCTGACAAGGGAGTTACTGGACACAAATAAATGCTATATTCTTGATTGTGGGCTGGAATTGTTTGTCTGGATGGGAAGAAACACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCTGCAGATGTAACATTTCTTGAGTTAGTCAGTGACCTTGATCGACAGAAATCCCACATAATTCGTGTAATCGAAGGATTTGAAACAGTGATGTTCAAGTCTAAGTTTGATTCTTGGCCTCAGACAACTGATGTAACTGTGTCTGAAGATGGTCGTGGAAAGGTAGCAGCACTTCTAAAACGCCAAGGAGTGAATGTCAAGGGTCTGCTTAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCTACATTGATTGCACAGGAAATTTGCAGGTTTGGCGTGTAAATGGTCAGGAAAAGATTCTCCTTCCTGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAGTATTCATATCCTGGTGAAGATAAGGAAGAGTTTCTTGTAGGAACATGGATTGGAAAGGCTAGCGTTGAGGAAGAAAGAGCTTCAGCTATTTCACTGGCAAGCAAAATGGTTGAGTCAATGAAGTTTCTTCCTTCCCAGACTCGTATTTATGAAGGGAATGAGCCAATTCAATTTTATTCTATTCTCCAAAGCTTGATTGTTTATAAGGGCGGACTTAGTGATGGATACAAGAATTACATTTCTGAAAAGGAAATTCCTGATGAGACATACAATGAGGATGGTGTTGCACTATTCCGCATCCAAGGCTCTGGACCAGACAATATGCAAGCTATACAAGTTGATCCAGTTGCTTCCTCCTTGAATTCCTCTTATTGCTACATACTTCATAATAGTTCTGCTGTCTTTACATGGACTGGAAGCCTTACCACCCCAGCTGTCCAGGAACTTGTTGAGAGGATGTTGGATTTGATAAAGCCGAATTTACAATCCAAGCCACAAAAGGAAGGGTCAGAATCTGAACAGTTTTGGGATTTATTAGGAGGAAAATCCGAGTATCCTAGCCAGAAGATTGTAAGGACTGCAGAAAGTGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGGAAATTTGAAGGCGACAGAGATATTCAACTTTTCCCAGGATGATTTGATGACAGAAGATATTTTCATCTTGGATTGTTACTCTGAAATCTTTGTCTGGGTTGGTCAGCAGGTTGACCCCAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCGTGATATTCTTCTAGAAAATTTATCTCATGAAACTCCTATATACATTGTCATGGAAGGGAATGAGCCACCTTTCTTCACTCGCTTCTTTGCATGGGAATCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTACAATAGTGAAAAATGGTGGTACTCCAACTGTGGATAAACCCAAACGAAGAGCACCAGCAACCTATGCGGGAAGATCTAGTACTATACCAGATAAATCCCAGCGATCCCGCAGTATGTCTTTTAGTCCAGATCGTGTTCGTGTGCGGGGAAGGTCGCCAGCCTTCAATGCCTTGGCAGCTGCATTTGAGAATCCCAATGCTAGGAACCTTTCAACCCCACCTCCAGTTGTTAGGAAACTGTATCCCAAATCTGTGACTCCGGATTCAGCAACATCGGCACCCAAATCTGCAGCTATAGCAGCACTTAGTTCTAGCTTTGAACAACCACCTTCAGCACGAGATAGTATTATACCTCGGTCAGTTAAAGTGAGTCACAGTCTAGAGGCTCCCAAACCAAAGCCCGAGACAAATGATAAGGAGAATCAGAATTCTATGAGCAGCAGAATAGAATCTCTTACCATAAAGGAAGATGTGAAAGAGGGCGAGGCTGAAGACGAGGAGGGTCTCCCTGTTTACCCATATGATCGCCTCAAAATAACATCTACTGATCCTGTAACAGACATTGATGTGACTAAGCGAGAGGCCTATCTTTCATCTGCGGATATTGGTCGCAGTGAGGAACTGAACATATCAAAGTGA 3045 0.4194 MGVLPCHLCDALVFHSFSKCSDVLETPKAIGLYEIVLFSPLISPFYAHYLLLYGCHSSASILFPLTIYSGLEIWHIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEEYKTRMFVCKGKHVVHVKEASLTLLLCYWCLRLVPFSRSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAAIEDGKLMADAETGEFWGFFGGFAPLPRKPAGDDEQHVDSHPTKLLCIEKGRAEPIKHDSLTRELLDTNKCYILDCGLELFVWMGRNTSLDERKSASGAADVTFLELVSDLDRQKSHIIRVIEGFETVMFKSKFDSWPQTTDVTVSEDGRGKVAALLKRQGVNVKGLLKADPVKEEPQPYIDCTGNLQVWRVNGQEKILLPASDQSKFYSGDCYIFQYSYPGEDKEEFLVGTWIGKASVEEERASAISLASKMVESMKFLPSQTRIYEGNEPIQFYSILQSLIVYKGGLSDGYKNYISEKEIPDETYNEDGVALFRIQGSGPDNMQAIQVDPVASSLNSSYCYILHNSSAVFTWTGSLTTPAVQELVERMLDLIKPNLQSKPQKEGSESEQFWDLLGGKSEYPSQKIVRTAESDPHLFSCNFSKGNLKATEIFNFSQDDLMTEDIFILDCYSEIFVWVGQQVDPKSRMQALTIGEKFLERDILLENLSHETPIYIVMEGNEPPFFTRFFAWESAKSAMLGNSFQRKLTIVKNGGTPTVDKPKRRAPATYAGRSSTIPDKSQRSRSMSFSPDRVRVRGRSPAFNALAAAFENPNARNLSTPPPVVRKLYPKSVTPDSATSAPKSAAIAALSSSFEQPPSARDSIIPRSVKVSHSLEAPKPKPETNDKENQNSMSSRIESLTIKEDVKEGEAEDEEGLPVYPYDRLKITSTDPVTDIDVTKREAYLSSADIGRSEELNISK 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1448 1014 Gene3D Severin 681 801 IPR029006 -
Bisa08g1448 1014 MobiDBLite consensus disorder prediction 867 894 - -
Bisa08g1448 1014 SUPERFAMILY Actin depolymerizing proteins 179 301 - -
Bisa08g1448 1014 FunFam Gelsolin 65 181 - -
Bisa08g1448 1014 MobiDBLite consensus disorder prediction 828 843 - -
Bisa08g1448 1014 PANTHER VILLIN 70 1003 IPR007122 GO:0051015
Bisa08g1448 1014 Gene3D Severin 448 589 IPR029006 -
Bisa08g1448 1014 Gene3D Severin 312 424 IPR029006 -
Bisa08g1448 1014 FunFam Villin-4 453 587 - -
Bisa08g1448 1014 Pfam Gelsolin repeat 78 161 IPR007123 -
Bisa08g1448 1014 Pfam Gelsolin repeat 709 780 IPR007123 -
Bisa08g1448 1014 Pfam Gelsolin repeat 219 280 IPR007123 -
Bisa08g1448 1014 Pfam Gelsolin repeat 334 371 IPR007123 -
Bisa08g1448 1014 SUPERFAMILY Actin depolymerizing proteins 663 784 - -
Bisa08g1448 1014 PRINTS Gelsolin family signature 391 412 IPR007122 GO:0051015
Bisa08g1448 1014 PRINTS Gelsolin family signature 504 522 IPR007122 GO:0051015
Bisa08g1448 1014 PRINTS Gelsolin family signature 537 557 IPR007122 GO:0051015
Bisa08g1448 1014 PRINTS Gelsolin family signature 600 620 IPR007122 GO:0051015
Bisa08g1448 1014 PRINTS Gelsolin family signature 712 734 IPR007122 GO:0051015
Bisa08g1448 1014 PRINTS Gelsolin family signature 479 495 IPR007122 GO:0051015
Bisa08g1448 1014 PRINTS Gelsolin family signature 741 760 IPR007122 GO:0051015
Bisa08g1448 1014 PRINTS Gelsolin family signature 660 679 IPR007122 GO:0051015
Bisa08g1448 1014 FunFam Gelsolin 588 680 - -
Bisa08g1448 1014 CDD gelsolin_S1_like 70 174 - -
Bisa08g1448 1014 SMART VILL_6 460 557 IPR007122 GO:0051015
Bisa08g1448 1014 SMART VILL_6 587 674 IPR007122 GO:0051015
Bisa08g1448 1014 SMART VILL_6 69 167 IPR007122 GO:0051015
Bisa08g1448 1014 SMART VILL_6 316 412 IPR007122 GO:0051015
Bisa08g1448 1014 SMART VILL_6 690 787 IPR007122 GO:0051015
Bisa08g1448 1014 SMART VILL_6 187 298 IPR007122 GO:0051015
Bisa08g1448 1014 FunFam Villin-like 1 681 802 - -
Bisa08g1448 1014 SUPERFAMILY Actin depolymerizing proteins 68 197 - -
Bisa08g1448 1014 Gene3D Severin 183 311 IPR029006 -
Bisa08g1448 1014 Gene3D Severin 66 182 IPR029006 -
Bisa08g1448 1014 MobiDBLite consensus disorder prediction 906 977 - -
Bisa08g1448 1014 FunFam Villin-like 1 182 311 - -
Bisa08g1448 1014 CDD gelsolin_S6_like 689 787 - -
Bisa08g1448 1014 SUPERFAMILY Actin depolymerizing proteins 450 596 - -
Bisa08g1448 1014 CDD gelsolin_S5_like 585 676 - -
Bisa08g1448 1014 MobiDBLite consensus disorder prediction 807 848 - -
Bisa08g1448 1014 CDD gelsolin_S4_like 454 553 - -
Bisa08g1448 1014 MobiDBLite consensus disorder prediction 954 974 - -
Bisa08g1448 1014 CDD gelsolin_S3_like 318 411 - -
Bisa08g1448 1014 SUPERFAMILY Actin depolymerizing proteins 579 680 - -
Bisa08g1448 1014 Gene3D Severin 590 680 IPR029006 -
Bisa08g1448 1014 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 317 495 IPR036180 -
Bisa08g1448 1014 SUPERFAMILY VHP, Villin headpiece domain 959 1003 IPR036886 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1448 Bisa-ChrBisa08 31037119 31051149 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1448 08 31037119 31051149 Bisa02g0369 02 6301685 6302980 CCT
Bisa02g0160 02 2143191 2144073 Bisa08g1448 08 31037119 31051149 CCT
Bisa08g1448 08 31037119 31051149 Bisa08g1448 08 31037119 31051149 ECH