Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0985 ATGTGTCCTTCCGGCCGCTCCCTCCCTTCTCCCTCCTCCTCTGCCTCCTCCTCCTCCTCCGCCGCCGACCCGTCTTTCCGACCCGCATTCGACTTCCTCGACGCTGACCGCGACGGCAAGATCAGCCGCGATGATCTCCGGACCTTCTACACCGGGAAGGCTGCCGGCGCCGGCGTCGTCGTCGATGTCGACGACGATGTCATTGGGACGATGATGACGGTGGCGGATACGAACAAGGACGGGTTCGTGGAGTACGATGAGTTCGAGAGGGTGGTTCTTGGAAACGGCGTCGTCGGAGGGAAAAACGGATTGTCGAGCTCTACGATGTCGTTTATGGAGGATGTGTTCAGAGTGATGGACACGGACGGAGACGGCAAGCTCAGCCACCAGGATTTGAAGAGCTTCATGGCCATGGCTGGCCTCGCCGCCACCGACGACGACATCGACGCCATGATCCTCTTGGGCGGCGGCGATCGCAATGGCGGCGTCACGTTCGAAGGCCTGCATCGAATCTTAAATAGCCATTGA 528 0.6042 MCPSGRSLPSPSSSASSSSSAADPSFRPAFDFLDADRDGKISRDDLRTFYTGKAAGAGVVVDVDDDVIGTMMTVADTNKDGFVEYDEFERVVLGNGVVGGKNGLSSSTMSFMEDVFRVMDTDGDGKLSHQDLKSFMAMAGLAATDDDIDAMILLGGGDRNGGVTFEGLHRILNSH 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0985 175 ProSiteProfiles EF-hand calcium-binding domain profile. 29 56 IPR002048 GO:0005509
Bisa08g0985 175 SMART efh_1 67 95 IPR002048 GO:0005509
Bisa08g0985 175 SMART efh_1 111 139 IPR002048 GO:0005509
Bisa08g0985 175 SMART efh_1 25 53 IPR002048 GO:0005509
Bisa08g0985 175 SMART efh_1 147 175 IPR002048 GO:0005509
Bisa08g0985 175 ProSitePatterns EF-hand calcium-binding domain. 120 132 IPR018247 -
Bisa08g0985 175 CDD EFh 113 166 IPR002048 GO:0005509
Bisa08g0985 175 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Bisa08g0985 175 SUPERFAMILY EF-hand 16 172 IPR011992 -
Bisa08g0985 175 ProSitePatterns EF-hand calcium-binding domain. 34 46 IPR018247 -
Bisa08g0985 175 PANTHER CALCIUM BINDING PROTEIN 25 91 - -
Bisa08g0985 175 MobiDBLite consensus disorder prediction 1 24 - -
Bisa08g0985 175 Pfam EF-hand domain pair 26 91 IPR002048 GO:0005509
Bisa08g0985 175 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Bisa08g0985 175 Gene3D - 100 174 - -
Bisa08g0985 175 Gene3D - 10 95 - -
Bisa08g0985 175 ProSiteProfiles EF-hand calcium-binding domain profile. 107 142 IPR002048 GO:0005509
Bisa08g0985 175 Pfam EF hand 112 136 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0985 Bisa-ChrBisa08 17862775 17863302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0985 1 172 EF-hand Containing Proteins AT5G49480 52.273 6.88e-52 161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0985 08 17862775 17863302 Bisa08g0985 08 17862775 17863302 ECH