Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0945 ATGGCCATGTCTCTGGCTCAGCAATTCACCGGCCTCAGGTGCTGCACCTCTCTCTCTTCTTCGCGTCTTTTCAAGCCCTTCTCTTCCAGGCAAACCCACCGGCGCACTGTGCTTCCCATTGTCGCCTCCATAGCAATCTCCAATGCGCAGAACAAAGAGAGGCTCAAGCTGAAAGAGCTCTTTGAAGAGGCCTACGAGCGCTGTCGTAATGCTCCCATGGAAGGTGTTTCCTTCACCGTTGAGGACTTTAACGATGCTCTCGATAAGTATGACTTCGATTCTGAAATTGGGACCAAGGTTAAAGGCACTGTGTTCCGCACAGATGCAAATGGAGCTCTTGTCGACATTACTGCAAAGTCTTCAGCATACTTGCCGTTACAAGAGGCATGCATCCACAGAATTAAACATGTAGCAGAGATAGGCATAGTTCCTGGTTTGACAGAGGAGTTTGTAATCATAGGTGAAAATGAAGCTGATGATAGCTTGATCTTGAGTTTTAGGACTCTCCAATATGATCTTGCATGGGAACGCTGTAGACAACTACAAGCAGAAGATGTTGTTGTCAAGGGTAAGATTGTTGGTGCAAACAAAGGTGGAGTGGTGGCTGTGGTGGAAGGCCTTAGAGGGTTTGTTCCTTTCTCACAAATATCATCGAAATCAACTGCAGAAGATCTTCTTGAGAAGGAGCTTCCTCTAAAGTTTGTGGAGGTGGATGAGGAACAGTCTAGACTTATTCTCAGTAACCGGAAGGCCATGGCTGACAGCCAGGCACAGCTAGGAATTGGATCAGTGGTCACTGGCTCTGTTCAAAGCCTAAAGCCATATGGTGCCTTCATTGACATTGGGGGAATTAATGGCCTTCTTCATGTTAGTCAGATCAGTCATGATCGTGTAACTGATATTTCAACTGTTCTTCAACCTGGTGATACTCTCAAGGTGATGATCTTAAGTCATGACCGAGAGAGAGGCCGAGTAAGCCTTTCCACAAAGAAGTTAGAACCTACACCGGGTGACATGATTCGCAATCCAAAGCTTGTGTTTGAGAAGGCGGAGGAGATGGCTCAGACATTTAGACAGAGAATAGCCCAAGCAGAAGCTATGGCTCGTGCAGACATGCTTAGGTTCCAGCCTGAGAGTGGATTAACTCTGAGCAGCGACGGTATCTTGGGACCACTTTCTCCTGATTTGCCTGCAGAGGGACTTGATCTGAGTGAGGTGCCCCCTGCTGATGAATCAGATTGA 1242 0.4726 MAMSLAQQFTGLRCCTSLSSSRLFKPFSSRQTHRRTVLPIVASIAISNAQNKERLKLKELFEEAYERCRNAPMEGVSFTVEDFNDALDKYDFDSEIGTKVKGTVFRTDANGALVDITAKSSAYLPLQEACIHRIKHVAEIGIVPGLTEEFVIIGENEADDSLILSFRTLQYDLAWERCRQLQAEDVVVKGKIVGANKGGVVAVVEGLRGFVPFSQISSKSTAEDLLEKELPLKFVEVDEEQSRLILSNRKAMADSQAQLGIGSVVTGSVQSLKPYGAFIDIGGINGLLHVSQISHDRVTDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLSPDLPAEGLDLSEVPPADESD 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0945 413 FunFam 30S ribosomal protein S1, chloroplastic 179 255 - -
Bisa08g0945 413 SUPERFAMILY Nucleic acid-binding proteins 180 253 IPR012340 -
Bisa08g0945 413 ProSiteProfiles S1 domain profile. 97 167 IPR003029 GO:0003676
Bisa08g0945 413 ProSiteProfiles S1 domain profile. 262 330 IPR003029 GO:0003676
Bisa08g0945 413 FunFam 30S ribosomal protein S1 81 178 - -
Bisa08g0945 413 Coils Coil 347 367 - -
Bisa08g0945 413 CDD S1_RPS1_repeat_hs4 262 330 - -
Bisa08g0945 413 MobiDBLite consensus disorder prediction 384 413 - -
Bisa08g0945 413 CDD S1_RPS1_repeat_ec2_hs2 185 249 - -
Bisa08g0945 413 SUPERFAMILY Nucleic acid-binding proteins 90 192 IPR012340 -
Bisa08g0945 413 CDD S1_RPS1_repeat_ec1_hs1 97 167 - -
Bisa08g0945 413 Gene3D - 79 177 IPR012340 -
Bisa08g0945 413 PRINTS Ribosomal protein S1 signature 206 223 IPR035104 -
Bisa08g0945 413 PRINTS Ribosomal protein S1 signature 115 129 IPR035104 -
Bisa08g0945 413 PRINTS Ribosomal protein S1 signature 97 115 IPR035104 -
Bisa08g0945 413 PRINTS Ribosomal protein S1 signature 188 204 IPR035104 -
Bisa08g0945 413 ProSiteProfiles S1 domain profile. 185 249 IPR003029 GO:0003676
Bisa08g0945 413 SMART S1_6 183 249 IPR022967 -
Bisa08g0945 413 SMART S1_6 260 330 IPR022967 -
Bisa08g0945 413 SMART S1_6 95 167 IPR022967 -
Bisa08g0945 413 FunFam 30S ribosomal protein S1 258 337 - -
Bisa08g0945 413 Gene3D - 178 255 IPR012340 -
Bisa08g0945 413 Pfam S1 RNA binding domain 183 247 IPR003029 GO:0003676
Bisa08g0945 413 Pfam S1 RNA binding domain 261 330 IPR003029 GO:0003676
Bisa08g0945 413 Gene3D - 256 334 IPR012340 -
Bisa08g0945 413 SUPERFAMILY Nucleic acid-binding proteins 261 340 IPR012340 -
Bisa08g0945 413 PANTHER 30S RIBOSOMAL PROTEIN S1 13 399 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0945 08 17237305 17240971 Bisa08g0945 08 17237305 17240971 ECH