Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0212 ATGATATTCTGTTTCTGTTTCGGTCCTAGCGCGAAGATGTGGAGATCGGTGTTTGCAAGACACGCGCTTCGCAACTTTAATGCTTCCAGAATCCAAATCCCTAAGGGGACGGTGATTCTCTCTAGTTCAGTAAGCCCAGCTCAATCTCCTAGCTCCTCTGCATGGATTTTTCCTCAAATGTCTGGTCTTTCCAAGAATCCCCGATTCTTCTCCCAGAATTCAGCTGAACACTCTCATTTTGAATCGCAAATCAGTGATTCCGCTGCGGATGATTCTATTCATGAGGTCTCAATGCACGCTTCTGAGGGTGTGGATGAATATGACAGTGCTCAGATGAGCAATGAGGCCCCTTTGGATAATGGGCCTCCAGAAGAATCTCTTGATGAAAATGGTGGTCTGCAGATGGATACTCCTGCTCATGGTTTTGATGAAGAGGGAGAAGAGGAGGTAAAAGAAGAGGCTTACGAGATTGATGTGGAGAAGTTGGAGAACGTGCTCTCTCTTCTCCAAAGTAGTGCTGATGGGTCCTTGGAATCACGTCTTAACGACATGGGTTTGATTCTGCATGAAGAGCTTGTCATCAAAGTAATTCAAACCCCTCTTGTTTTGGGTGAGAATCTTATCAGGTTTTTCTGGTGGGCTTGGAAGGAGAAATCATTCACGGTCACCACCCCTGTTGTGCAATCCCTTGTTTTGGCAATATGCAGTGGTCTTAAGAAGAAAGAAATCTACTCCCTCTGGGACTTAATTAAGGATATCAACGAGAAAGAGAGTGGGGTACTGAATGTGGATATTCTTAATGAATTGATAGTTTCATTCTCTAAATTGGGCAAGGGAAAGGCTGCGTTTGATGCCTTCAACAGTTTTGAGGAACTGGGATGTGTGCCAAATGCAGACACCTATTACTTTACTATTGAAGCTCTTTGTAGACGATCATTTTTTGATTGGGCTTGGTCTGTTTGTGAAATGATGCTTGATGCACAAAGCCTGCCTGATGGTGAGAAAGTTGGTAAGATAATATCTTGGTTTTGCAAGGGGAGAAACGCCAAAGCTGCCCATTCAGTGTATGTGGTAGCAAGAGAGAAAAAGCAGCATCTGCCTACGTCTTCATTTAACTTTTTGATTTGTCAACTTAGTCAAAAAAATGAAACTGTACAGTTAGCTCTACAGATGTTAGATGATATCCCTGGAGAGGTGAAGAAACATGCAATAAAGCCATATTCAGCTGTTGTTCAAGCCTTGTGCAGGATCAGAGATGTTGATGCGGCCAAGCAATTGGTCTTAAGAATGATTGCGGATGGTCCGCCTCCTGGAAATGCCGTTTTCAATTATGTTATTACAGGATATTCTAAAGTTGGGGAAATGGAACAGGCATTGGAGATGATGAAGCTAATGGAAACTAGAGGCTTAAAACCAGATTTGTGCGCATATACTGTTCTTATAAGTGGCTATTCAAATGGTGGTGAGATGGAACGGGCTTCCGAGGTATTCACGGAAGCTAAAAAGAAGCATGGGAAGTTAACCCCTGTGACTTACCATACGCTAACACGGGGATATTGCAAGCTAGAACAGTTTGACAAGGCCTTGGAATTATTGGCAGAGATGAAAAATTTTGGAGTCCGGCCAACTGTGGATGAATATGAGAAGTTGATCCAGTCTCTCTGCCTGAAGGCTTTGGATTGGCAAACGGCAGAGAAGCTCCAAGAGGAAATGAAAGAAAATGGCTTGTATCTGAAGGGAATCACTAGGGCCCTGGTTAGAGCAGTCAAGGAAATGGAAGAGGAGGTTGAGGAGACTGAAAAAGGCAAAAATATTGGTAGGCAATCAACTGAGGTTTTGATAGGTTTAATGTGTCAGATTGACGTCTTTCTAATATTGAATGCTATCCTGGTTGGCTATGTTTCGGAGACCTATGATGCCATGCTGGGTGAAAAAATGCCTATTGATGATCTTTGGGTAAAAAAAGATTGGAATCAGCTACATCACTGGGACCCTCCAGGACAACGTAGAGGGACTAGGCAGCTTTCTTTCATGTTCAAGTTTCCTTTCTATGAGGTATACTCATTCAATCATTTGGAGCAATTAAGTGACAACTTGATAAAGGAGGACAAGTTCTCAGATTTTACAGTAGGTGGTGGCTGGCGAGTGTCTGCTTTCGCCTCTCTGCGGCTTGCCTCGTCACTGAACGCCTCAAGTGGCTCACTGATTGGAAATCCACTGAACTCAAATCAGTTGAAATACTCATCCTCCTCAAGCGGCTCACTGATTGGGAATCCACTGAACTCGAATCAGTTGAAATATTCTGAGCCGCCAAACACTGCTTGCAGAATTGGAGCCATGGCGGTTTCGTTTTCTTCTGCGATCTCACACTCTGCCCGCATTTCCCCTCCAAACACTCTGTTTCACCTGCACAGGAACATCGACGGATCTCAATGCCGTCCTTTCCGCCTGCTGAAGCGGCGTTCGCATCTAATTCGAAAGGGTCTTACTTCACCATTGGGAAGGGAGACACTGAACACCAGGATATGTGCTTCACTTGCAGATGTTTCTCTGGATGTATCTGTCGAGGAAAAACAGCTCCCCAGAGGAGAAACTTGGTCTGTTCACAAATTTGGAGGAACCTGTGTGGGAACACCACAAAGAATAAAGAATGTTGCAGATATAATAATTAATGATGATTCAGAGAGGAAATTGGTGGTTGTCTCTGCAATGTCAAAGGTGACAGATATGATATATGACCTTATTCAAAAGGCTGAATCACGTGATGAGTCTTATATATCTGCACTGGATGCTGTTTTAGAGAAGCACAGCTCTGCTGCACATGAATTACTTGATGGAGATGATCTTGCTCTTTTCTTATCTAAGTTGCATGAGGATATCAGTAACCTTAAGGCAATGCTTCGTGCAATTTACATAGCTGGTCATGCTACAGAATCATTTGCAGATTTTGTTGTGGGACATGGGGAATTATGGTCTGCTCATATGTTGTCTTCAGTTATTCGGAAGAATGGGACTGACTGCAAATGGATGGATACTAGGGAAGTCCTTATTGTAAATCCTACTGCTTCTAATCAAGTTGATCCTGACTATTTGGAATCTGAGCGAAGACTCAAGAAATGGTACTCTTTGAATCCATCCAACGTAATCATTGCTACTGGATTTATTGCAAGCACACTGCAAAATATTCCTGCTACACTGAAGAGAGATGGAAGTGATTTCTCAGCAGCAATCATGGGTGCTTTATTTAGAGCTCGTCAAGTTACAATTTGGACAGATGTTGATGGTGTGTATAGTGCAGATCCTCGAAAAGTTGGTGAGGCTGTAATCTTGAAGACATTGTCATATCAAGAGGCATGGGAAATGTCTTATTTTGGCGCAAATGTTTTACATCCCCGTACAATCATTCCAGTGATGCAATATGGCATACCCATTATAATAAGGAACATTTTCAACCTCTCTGCCCCTGGAACAAAGATCTGCCACTCCTCTATCAATGACGATGAGGATAGGAAGAACTTAAATTATTTTGTTAAAGGGTTTGCAACAATAGATAACTTGGCACTTGTAAATGTTGAGGGAACTGGAATGGCTGGTGTTCCAGGAACAGCCGGTGCTATTTTTTCTGCTGTCAAAGATGTTGGAGCTAATGTTATCATGATATCTCAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCTGTACCTGAGAAGGAAGTAAAAGCTGTTGCTGAAGCATTGCAGTCCAGATTTCGTCAAGCTTTGGATGCTGGGCGTCTATCTCAGGTTGCAGTTATTCCAAACTGTAGCATTTTGGCTGCTGTTGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCTCCTTGTTCAATGCATTGGCTAAGGCCAATATCAATGTCCGTGCTATAGCACAAGGTTGTTCTGAGTACAATATTACTGTCGTTATTAAGCGAGAAGATTGTATAAAGGCTCTTCGGGCTGTCCATTCAAGATTTTATCTTTCAAGAACCACCATCGCAATGGGCATTATTGGACCTGGATTAATTGGAAGTACACTACTAGACCAGCTAAGGGATCAGACTGCAGTTCTGAAAGAAGAATTTAACATTGATTTGCGTGTATTGGGCATCGTTGGTTCAAAGTCAATGCTTCTTAGTGATCAGGGTATTGACTTAGCTGGGTGGAGAGAACTTCAAGAGGAAAAGGGACAAGTGGCTAATTTGGAGAAGTTTGTTCAACATGTGCACGGAAATCATTTTATACCCAATACTGTTTTGGTGGACTGCACAGCTGACTCCATCATTGCTGGTCATTACTATGATTGGTTGTGCAAAGGAATACATGTAGTCACCCCCAACAAAAAGGCAAATTCAGGGCCACTTGATCAGTATTTGAGGTTAAGAGCTCTTCAAAGGCAATCATATACACATTACTTCTATGAAGCTACTGTTGGAGCTGGTCTTCCAATTATTAGCACTCTACGGGGACTCCTTGAAACTGGAGACAGAATATTGCAAATTGAAGGCATCTTCAGTGGGACTTTGAGCTACATCTTTAATAACTTCAAAGATGGCCGGCTTTTTAGTGAGGTAGTTACTGAAGCAATGGAAGCAGGTTATACTGAGCCAGATCCAAGGGATGATCTGTCTGGAACAGATGTTGCTAGAAAGGTGATAATTCTTGCGAGGGAATCTGGTGTAAAGCTTGAACTATCTGATATTCCTGTTGAGAGCCTTGTGCCAGAACCGCTAAGGGCTAGTGCATCAGCTCAGGAGTTTATGGATCAACTACCTAAATTTGACCTGGATATGACAAAGAAACAACAGGAGGCTGATAACACCGGGGAAGTCTTGAGATATGTGGGAGTGGTGGACGTGACTAATAAAAAAGGAGTCGTCCAGCTGCGAAGATACAAGAAGGATCATCCGTTTGCACAGCTGTCTGGATCAGATAATATAATTGCATTTACCACAAGAAGGTATAAGGATCAGCCTCTGATAGTTCGTGGCCCAGGGGCTGGTGCTCAAGTCACAGCTGGTGGAGTATTCAGTGACATCTTACGACTTGCCTCGTATCTTGGTGCACCATCATAG 5088 0.4302 MIFCFCFGPSAKMWRSVFARHALRNFNASRIQIPKGTVILSSSVSPAQSPSSSAWIFPQMSGLSKNPRFFSQNSAEHSHFESQISDSAADDSIHEVSMHASEGVDEYDSAQMSNEAPLDNGPPEESLDENGGLQMDTPAHGFDEEGEEEVKEEAYEIDVEKLENVLSLLQSSADGSLESRLNDMGLILHEELVIKVIQTPLVLGENLIRFFWWAWKEKSFTVTTPVVQSLVLAICSGLKKKEIYSLWDLIKDINEKESGVLNVDILNELIVSFSKLGKGKAAFDAFNSFEELGCVPNADTYYFTIEALCRRSFFDWAWSVCEMMLDAQSLPDGEKVGKIISWFCKGRNAKAAHSVYVVAREKKQHLPTSSFNFLICQLSQKNETVQLALQMLDDIPGEVKKHAIKPYSAVVQALCRIRDVDAAKQLVLRMIADGPPPGNAVFNYVITGYSKVGEMEQALEMMKLMETRGLKPDLCAYTVLISGYSNGGEMERASEVFTEAKKKHGKLTPVTYHTLTRGYCKLEQFDKALELLAEMKNFGVRPTVDEYEKLIQSLCLKALDWQTAEKLQEEMKENGLYLKGITRALVRAVKEMEEEVEETEKGKNIGRQSTEVLIGLMCQIDVFLILNAILVGYVSETYDAMLGEKMPIDDLWVKKDWNQLHHWDPPGQRRGTRQLSFMFKFPFYEVYSFNHLEQLSDNLIKEDKFSDFTVGGGWRVSAFASLRLASSLNASSGSLIGNPLNSNQLKYSSSSSGSLIGNPLNSNQLKYSEPPNTACRIGAMAVSFSSAISHSARISPPNTLFHLHRNIDGSQCRPFRLLKRRSHLIRKGLTSPLGRETLNTRICASLADVSLDVSVEEKQLPRGETWSVHKFGGTCVGTPQRIKNVADIIINDDSERKLVVVSAMSKVTDMIYDLIQKAESRDESYISALDAVLEKHSSAAHELLDGDDLALFLSKLHEDISNLKAMLRAIYIAGHATESFADFVVGHGELWSAHMLSSVIRKNGTDCKWMDTREVLIVNPTASNQVDPDYLESERRLKKWYSLNPSNVIIATGFIASTLQNIPATLKRDGSDFSAAIMGALFRARQVTIWTDVDGVYSADPRKVGEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMQYGIPIIIRNIFNLSAPGTKICHSSINDDEDRKNLNYFVKGFATIDNLALVNVEGTGMAGVPGTAGAIFSAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALQSRFRQALDAGRLSQVAVIPNCSILAAVGQKMASTPGVSASLFNALAKANINVRAIAQGCSEYNITVVIKREDCIKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLLDQLRDQTAVLKEEFNIDLRVLGIVGSKSMLLSDQGIDLAGWRELQEEKGQVANLEKFVQHVHGNHFIPNTVLVDCTADSIIAGHYYDWLCKGIHVVTPNKKANSGPLDQYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVTEAMEAGYTEPDPRDDLSGTDVARKVIILARESGVKLELSDIPVESLVPEPLRASASAQEFMDQLPKFDLDMTKKQQEADNTGEVLRYVGVVDVTNKKGVVQLRRYKKDHPFAQLSGSDNIIAFTTRRYKDQPLIVRGPGAGAQVTAGGVFSDILRLASYLGAPS 1695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0212 1695 Gene3D Dihydrodipicolinate Reductase; domain 2 1498 1669 - -
Bisa08g0212 1695 ProSitePatterns Aspartokinase signature. 868 876 IPR018042 GO:0004072|GO:0008652
Bisa08g0212 1695 Gene3D Tetratricopeptide repeat domain 203 329 IPR011990 GO:0005515
Bisa08g0212 1695 Pfam Amino acid kinase family 867 1148 IPR001048 -
Bisa08g0212 1695 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1335 1509 IPR036291 -
Bisa08g0212 1695 SUPERFAMILY Carbamate kinase-like 866 1161 IPR036393 -
Bisa08g0212 1695 ProSiteProfiles ACT domain profile. 1272 1349 IPR002912 -
Bisa08g0212 1695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 403 437 IPR002885 -
Bisa08g0212 1695 Pfam PPR repeat family 440 485 IPR002885 -
Bisa08g0212 1695 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1487 1672 - -
Bisa08g0212 1695 ProSiteProfiles ACT domain profile. 1191 1266 IPR002912 -
Bisa08g0212 1695 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 1498 1669 - -
Bisa08g0212 1695 Pfam PPR repeat 407 434 IPR002885 -
Bisa08g0212 1695 Pfam PPR repeat 510 540 IPR002885 -
Bisa08g0212 1695 Coils Coil 582 602 - -
Bisa08g0212 1695 Pfam Homoserine dehydrogenase, NAD binding domain 1343 1479 IPR005106 GO:0016491|GO:0050661
Bisa08g0212 1695 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 865 1162 - -
Bisa08g0212 1695 NCBIfam pentatricopeptide repeat 441 473 IPR002885 -
Bisa08g0212 1695 NCBIfam pentatricopeptide repeat 510 543 IPR002885 -
Bisa08g0212 1695 CDD AAK_AK-HSDH 866 1160 IPR041743 -
Bisa08g0212 1695 PANTHER - 849 1695 IPR011147 GO:0004072|GO:0004412|GO:0009067
Bisa08g0212 1695 NCBIfam aspartate kinase 866 1330 IPR001341 GO:0004072|GO:0008652
Bisa08g0212 1695 Gene3D - 866 1162 IPR036393 -
Bisa08g0212 1695 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 1174 1332 - -
Bisa08g0212 1695 Pfam Homoserine dehydrogenase 1487 1685 IPR001342 GO:0006520
Bisa08g0212 1695 SUPERFAMILY ACT-like 1175 1250 IPR045865 -
Bisa08g0212 1695 Gene3D - 1174 1332 - -
Bisa08g0212 1695 Gene3D Tetratricopeptide repeat domain 488 608 IPR011990 GO:0005515
Bisa08g0212 1695 Gene3D Tetratricopeptide repeat domain 345 487 IPR011990 GO:0005515
Bisa08g0212 1695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 508 542 IPR002885 -
Bisa08g0212 1695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 438 472 IPR002885 -
Bisa08g0212 1695 Gene3D - 1338 1687 - -
Bisa08g0212 1695 SUPERFAMILY ACT-like 1257 1346 IPR045865 -
Bisa08g0212 1695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 473 507 IPR002885 -
Bisa08g0212 1695 Pfam ACT domain 1195 1249 IPR002912 -
Bisa08g0212 1695 MobiDBLite consensus disorder prediction 104 131 - -
Bisa08g0212 1695 CDD ACT_AKi-HSDH-ThrA-like_1 1186 1265 - -
Bisa08g0212 1695 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 1338 1514 - -
Bisa08g0212 1695 CDD ACT_AKi-HSDH-ThrA_2 1267 1332 - -
Bisa08g0212 1695 ProSitePatterns Homoserine dehydrogenase signature. 1533 1555 IPR019811 GO:0006520
Bisa08g0212 1695 Pfam ACT domain 1265 1328 IPR027795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0212 Bisa-ChrBisa08 3945169 3966780 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0212 228 619 Miscellaneous Gene Families AT4G11690 23.438 2.97e-25 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0212 08 3945169 3966780 Bisa08g0212 08 3945169 3966780 ECH