Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0145 ATGGTGAGAAAGAAGGTCCCTGATTGGCTCAACAGTTCTCTCTGGTCCTCCCCTACTCCTTCCTCCAACGACCACCGGGATCTCCGCCACTCCGCCACCACTTCCACCACCGCAACCTACGACAATGAAGAGCGGGACCGCCCCGTCGTGCACCCTCCTACATGCGCGCCTTCTTCTCCTTCGCGACCCCCCAGAGAACATGCTCCGCAGCCGCAGAGAATCGAAGAATCACGGACTAATAGCGTTACGACGGATCACAATGGCACTTCTTCTCCTCCTCCTTCTTCCGATGACATCTCTCGGCAGGCTCAATTGTTGGCCGAGTTATCAAAAAAGGTGGTTGATATACGAGAGTTGCGGAGAATCGCATGTCAAGGTCTCCCTGATGGTGCTGGGATACGTTCTACAGTATGGAAGCTTTTGCTTGGATATCTTCCACTGGATCGTGGTCTTTGGTCATCTGAATTAGCAAAGAAGAGGTCTCAATATAAACATTTCAAAGAGGATATCCTAATGAATCCTTCAGAAATTACAAGGAGGATGTACAGCTCTACAAGTGACACTTCTGATGCTAAATGTGGGAGCCGAGGCTTGCTCTCTAGATCTGAAATCCCTCAAGGGGAGCATCCTCTGAGTCTTGGGAAGACTAGCATATGGAATCAGTTCTTCCAGGACACAGAGATAATAGATCAGATTGATCGAGATGTAAAGCGAACTCATCCAGATATGAATTTTTTTTCTGGTGATTCACAGTTTGCAAAATCAAATCAGGAGGCTTTGAAGAACATATTAATTATTTTTGCCAAGTTAAATCCAGGTGTAAAATATGTTCAAGGGATGAATGAGATATTGGCTCCTCTATTCTATGTGTTCAAAAATGATCCTGATGGGGAAAATGCAGCCTTTGCTGAAGCAGACACATTCTTTTGTTTTGTTGAGCTACTAAGTGGCTTCCGAGATAATTTTTGTCAACAACTTGACAATAGTGTTGTGGGAATCCGTTCCACTATTGCACGATTGTCCCAGCTTTTGAAGGAACATGATGAAGAGCTGTGGCGGCATCTTGAGATCACAACTAAAGTCAATCCCCAGTTCTATGCATTTAGGTGGATTACCCTCCTCTTGACTCAGGAATTCAATTTTGCTGAAAGCCTTCACATTTGGGACACTCTTTTAAGTGATCCAGAAGGACCACAGGAGACTCTGTTACGGGTATGCTGTGCGATGCTAATTATTGTTCGGAGACGCCTCCTAGCGGGTGATTTCACTTCCAATCTCAAGTTGCTGCAAAATTACCCCTCTACAAACATTAGCCATTTGCTCTATGTTGCCAACAAGTTGCGTGTACAGTCAGTGTAA 1359 0.4533 MVRKKVPDWLNSSLWSSPTPSSNDHRDLRHSATTSTTATYDNEERDRPVVHPPTCAPSSPSRPPREHAPQPQRIEESRTNSVTTDHNGTSSPPPSSDDISRQAQLLAELSKKVVDIRELRRIACQGLPDGAGIRSTVWKLLLGYLPLDRGLWSSELAKKRSQYKHFKEDILMNPSEITRRMYSSTSDTSDAKCGSRGLLSRSEIPQGEHPLSLGKTSIWNQFFQDTEIIDQIDRDVKRTHPDMNFFSGDSQFAKSNQEALKNILIIFAKLNPGVKYVQGMNEILAPLFYVFKNDPDGENAAFAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTIARLSQLLKEHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFAESLHIWDTLLSDPEGPQETLLRVCCAMLIIVRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRVQSV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0145 452 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 214 323 - -
Bisa08g0145 452 SMART tbc_4 123 421 IPR000195 -
Bisa08g0145 452 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 95 430 - -
Bisa08g0145 452 MobiDBLite consensus disorder prediction 53 67 - -
Bisa08g0145 452 MobiDBLite consensus disorder prediction 74 100 - -
Bisa08g0145 452 ProSiteProfiles TBC/rab GAP domain profile. 128 395 IPR000195 -
Bisa08g0145 452 Pfam Rab-GTPase-TBC domain 225 416 IPR000195 -
Bisa08g0145 452 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 332 449 IPR035969 -
Bisa08g0145 452 Gene3D - 331 451 - -
Bisa08g0145 452 Gene3D - 98 151 - -
Bisa08g0145 452 MobiDBLite consensus disorder prediction 1 100 - -
Bisa08g0145 452 FunFam TBC1 domain family member 13 330 451 - -
Bisa08g0145 452 FunFam TBC1 domain family member 13 212 323 - -
Bisa08g0145 452 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 107 354 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0145 Bisa-ChrBisa08 1863729 1869028 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0145 08 1863729 1869028 Bisa08g0145 08 1863729 1869028 ECH