Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3071 ATGGATGATCCGTTTGACACCAATGTTGGCACTGCTGAGATATTCTATTCTATTTCCAGTATTTTCTTCCGCCATCGTATAAATACCGAAGGGTGCTCTCATTTTCTCCATATTTTTTTTTTTGAGGATCGAGGATCGTTCCCGGTGCGTTTCAGCGCATCACAACCCTCGGGGAAGAAAGGAAACTATCGTAAAAACTGTGAGACACCGCCGGAAAATTACGCTAATCTTAAAACCCTATCTTCTGGAACTCTAGTTGGAAACTCTGAATCTTCAATTGAATTTCAATCGATTTTCTTCGTTTTCTTTGAAGAAGAAAACATGTCTGATGCGTACTGCTCCGACTGTAAGCGCCAGACCGAGGTGGTCTTCGATCACTCGGCTGGTGACACTGTGTGTTCCGAGTGCGGACTCGTGCTCGAGTCCCATTCCATTGATGAGACATCCGAGTGGCGTACCTTCGCGAACGAGTCTGGTGATAACGATCCGGTCCGTGTTGGAGGACCTTCCAACCCGCTCTTAACTGACGGCGGCTTATCAACCGTGATAGCGAAGCCCAACGGAACAACCGGCGAATTTCTCTCATCGTCTCTGGGTCGGTGGCAGAATCGCGGGTCGAACCCGGATCGCGGGCTGATTCTGGCCTTCAAGACCATTGCCACCATGTCTGATAGGTTGGGACTCGTTGCAACCATTAAGGATCGAGCTAATGAAATATATAAGAGGGTTGAAGATCAAAAGTCCAGTAGAGGAAGAAACCAGGATGCATTATTGGCTGCTTGCCTCTACATTGCTTGTCGACAAGAAGACAAGCCACGCACTGTAAAGGAAATTTGCTCTGTTGCCAATGGAGCTACAAAGAAGGAAATTGGCCGGGCAAAAGAATACATAGTGAAACAACTGGGGTTGGAGAAGGGTCAGTCTGTGGAGATGGGAACAATACATGCTGGGGACTTTATGAGGCGATTTTGTTCTAATCTTGGCATGAATAATCAAGCTGTTAAAGCTGCTCAGGAAGCTGTGCAGAAATCAGAAGAATTTGATATAAGGAGGAGCCCCATATCAATTGCTGCCGCAGTGATATACATTATAACTCAGCTTTCAGATGATAAGAAACCTCTCAAAGATATATCAGTTGCCACCGGAGTTGCAGAAGGAACCATCAGGAACTCCTACAAGGATCTTTATCCTCATGTTTCAAAAATAATACCAAATTGGTATGCCAAGGAGGAGGATCTTAAGAACCTTTGCAGCCCTTGA 1260 0.4579 MDDPFDTNVGTAEIFYSISSIFFRHRINTEGCSHFLHIFFFEDRGSFPVRFSASQPSGKKGNYRKNCETPPENYANLKTLSSGTLVGNSESSIEFQSIFFVFFEEENMSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPSNPLLTDGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3071 419 SMART cyclin_7 217 299 IPR013763 -
Bisa07g3071 419 SMART cyclin_7 318 397 IPR013763 -
Bisa07g3071 419 Pfam TFIIB zinc-binding 112 154 IPR013137 -
Bisa07g3071 419 CDD CYCLIN_TFIIB_rpt1 215 302 - -
Bisa07g3071 419 ProSiteProfiles Zinc finger TFIIB-type profile. 109 141 IPR013137 -
Bisa07g3071 419 FunFam Transcription initiation factor IIB 112 300 - -
Bisa07g3071 419 SUPERFAMILY Zinc beta-ribbon 110 157 - -
Bisa07g3071 419 Gene3D - 112 300 - -
Bisa07g3071 419 Gene3D - 315 418 - -
Bisa07g3071 419 Pfam Transcription factor TFIIB repeat 311 397 IPR013150 GO:0017025
Bisa07g3071 419 Pfam Transcription factor TFIIB repeat 210 292 IPR013150 GO:0017025
Bisa07g3071 419 ProSitePatterns Transcription factor TFIIB repeat signature. 251 266 IPR023486 -
Bisa07g3071 419 FunFam transcription initiation factor IIB 198 304 - -
Bisa07g3071 419 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 111 416 IPR000812 GO:0006352|GO:0070897
Bisa07g3071 419 FunFam Transcription initiation factor IIB 315 418 - -
Bisa07g3071 419 SUPERFAMILY Cyclin-like 212 303 IPR036915 -
Bisa07g3071 419 SUPERFAMILY Cyclin-like 314 415 IPR036915 -
Bisa07g3071 419 PRINTS Transcription initiation factor IIB signature 259 278 IPR000812 GO:0006352|GO:0070897
Bisa07g3071 419 PRINTS Transcription initiation factor IIB signature 383 397 IPR000812 GO:0006352|GO:0070897
Bisa07g3071 419 PRINTS Transcription initiation factor IIB signature 286 301 IPR000812 GO:0006352|GO:0070897
Bisa07g3071 419 PRINTS Transcription initiation factor IIB signature 319 337 IPR000812 GO:0006352|GO:0070897
Bisa07g3071 419 PRINTS Transcription initiation factor IIB signature 126 146 IPR000812 GO:0006352|GO:0070897
Bisa07g3071 419 PRINTS Transcription initiation factor IIB signature 162 183 IPR000812 GO:0006352|GO:0070897
Bisa07g3071 419 PRINTS Transcription initiation factor IIB signature 148 161 IPR000812 GO:0006352|GO:0070897
Bisa07g3071 419 PRINTS Transcription initiation factor IIB signature 351 367 IPR000812 GO:0006352|GO:0070897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3071 Bisa-ChrBisa07 64755213 64758886 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2393 03 35415768 35420263 Bisa07g3071 07 64755213 64758886 CCT
Bisa07g3071 07 64755213 64758886 Bisa07g3071 07 64755213 64758886 ECH