Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2427 ATGTCGGTGAAGGAGTGTGATCACCACAAGGGGTATCGCCGGAAAATCTTCCGACGAATATTCGCGGGAATCCTAATCTTCCTGTTCATAGTGCTCTTAACGATCCTGATAATCTGGTTGATCCTGAGGCCATCGAAGCCCACCTTCATCCTGCAAGACGTCACCGTATACGCCTTCAACGCCAGCGTGCCCAACTTCCTGACCTCCAACTTCCAAGTGACCCTGTCTTCCCGCAACCCCAACGACAAGATCGGCGTCTACTACGACCGCCTCGACGCCTACGTGGATTACCGGAACCAGCAAGTGACGTATCGCACCGCCATTCCCCCCTCCTATCAGGGTCACAAGGAGGTCGATGTTTGGTCTCCCTTCGTCTACGGGACCAACGTGCCCGTCGCTCCTTACAATTTTGTCGCACTCAGCCAGGACCAGTCAAACGGCAACATTTTGGTCACCATCAAGATTGACGGACGCGTCAGATGGAAAGTCGGGTCCTTCATCTCCGGCCGCTACCATCTCTACGTGCGCTGCCCTGCTTATATCACTTGGGGTCCCCGCAGCTCTGGAATCTCCGTCGGCAATAACGCCGTTAAGTATCAAATGGTCCAGCGATGTTACGTTAGCATTTGA 630 0.5397 MSVKECDHHKGYRRKIFRRIFAGILIFLFIVLLTILIIWLILRPSKPTFILQDVTVYAFNASVPNFLTSNFQVTLSSRNPNDKIGVYYDRLDAYVDYRNQQVTYRTAIPPSYQGHKEVDVWSPFVYGTNVPVAPYNFVALSQDQSNGNILVTIKIDGRVRWKVGSFISGRYHLYVRCPAYITWGPRSSGISVGNNAVKYQMVQRCYVSI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2427 209 PANTHER OS05G0367900 PROTEIN 17 196 IPR044839 GO:0098542
Bisa07g2427 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2427 Bisa-ChrBisa07 54514169 54514798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2427 21 177 EF-hand Containing Proteins AT5G21130 21.019 1.84e-07 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2146 03 30762719 30763348 Bisa07g2427 07 54514169 54514798 CCT
Bisa07g2427 07 54514169 54514798 Bisa07g2427 07 54514169 54514798 ECH