Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2087 ATGGTGGCTATCTTCTCTCTGCTAACAGGGTGGCCTGGCCCAAGTGGGTTTGGTTCAGCTTCAACAGCAGAGCAGGTCACTGAAGGAATTGATGCCTCCAAGCTCACCGCCATTGTCACAGGAGGAGCGAGTGGAATTGGGTTAGAGACAGCTAGAGTCCTGGCTCTTCGAAGGGTTCGTGTGATCATTGCTGCGAGGGACATGGAAGCTTCAAAGAAAGCTAGGAAACTTATTCTGCTGGAAAACGAGTCTGCTCGAGTTGATATACTGAAGCTCGATCTTTGTTCATTCAAGTCTATCAGACAATTTGTTGACAACTTCAACGCTCTTGATCTTCCTCTCAACATCTTAATAAACAATGCTGGAGTCATGTTCTGCCCTTTCCATCTCTCAGAGGATGGTATCGAGATGCAGTTTGCAACAAATCATATCGGTCACTTCCAACTGACCAACCTTCTTCTCGACAAAATGAAACAAACGGCGCAATCCAGTGGAATAGAGGGCAGGATCGTGAATCTCTCATCAATTGCCCATAACTATACTTACAGAAAGGGGATTCGATTTGATAAGATTAATGATAAAAATGGTTACTCTGACAAGAAGGCATATGGGCAATCCAAGTTGGCTAACATTTTACACGCAAATGAACTGTCTCGCCGCCTGAAGGAAGAGGGTGCGAACATTACAGCCAATTCGGTCCACCCAGGAGTGATACTGACTCCTCTCATGAGACATTCTTCCTTCACCATGCATCTTCTGAAGGTGTTCACCTTTTACATATGGAAGAACGTCCCACAGGGAGCGGCCACGACGTGTTATGTTGCTCTGCACCCACAAGTGAAAGGAGTAAGTGGGAAGTACTTTGTGGATTGCAATGAGCAGAAGACAAGTGCATTTGCAAGGGACCAAAAGCTCGCAGCCAAACTCTGGGATTTCAGCAACAGCCTCATCAATTCATTTTCTAAATCTTAA 972 0.4558 MVAIFSLLTGWPGPSGFGSASTAEQVTEGIDASKLTAIVTGGASGIGLETARVLALRRVRVIIAARDMEASKKARKLILLENESARVDILKLDLCSFKSIRQFVDNFNALDLPLNILINNAGVMFCPFHLSEDGIEMQFATNHIGHFQLTNLLLDKMKQTAQSSGIEGRIVNLSSIAHNYTYRKGIRFDKINDKNGYSDKKAYGQSKLANILHANELSRRLKEEGANITANSVHPGVILTPLMRHSSFTMHLLKVFTFYIWKNVPQGAATTCYVALHPQVKGVSGKYFVDCNEQKTSAFARDQKLAAKLWDFSNSLINSFSKS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2087 323 PRINTS Glucose/ribitol dehydrogenase family signature 226 243 IPR002347 -
Bisa07g2087 323 PRINTS Glucose/ribitol dehydrogenase family signature 36 53 IPR002347 -
Bisa07g2087 323 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Bisa07g2087 323 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Bisa07g2087 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Bisa07g2087 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Bisa07g2087 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Bisa07g2087 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 36 295 IPR036291 -
Bisa07g2087 323 Gene3D - 26 321 - -
Bisa07g2087 323 Pfam short chain dehydrogenase 36 182 IPR002347 -
Bisa07g2087 323 CDD retinol-DH_like_SDR_c_like 36 310 - -
Bisa07g2087 323 PANTHER RETINOL DEHYDROGENASE 14 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2087 Bisa-ChrBisa07 49307332 49309163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g2087 35 242 Miscellaneous Gene Families AT2G29340 27.962 6.14e-09 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0713 03 9498460 9501292 Bisa07g2087 07 49307332 49309163 CCT
Bisa07g2087 07 49307332 49309163 Bisa07g2087 07 49307332 49309163 ECH