Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1517 ATGGCTCCCGATATCACCACCGCAGCAGCCAACGCCGCCGCCTCACAAGCCAAGGCCAAAGGGAAGAGTCGTGCCTTCGTGACTTTTCTGGCTGGTAATGGTGACTACGTCAAGGGTGTGGTGGGGCTAGTCAAAGGTCTCAGGAAGGTGAAGAGCAAGTACCCTTTGGTGGTGGCGATTCTGCCGGACGTTCCGCCGGAGCACCGTCAGATTCTGGTGGCTCAAGGTTGCATTGTCCGTGAGATCGAGCCAGTTTACCCACCCGAGAACCAGACCCAGTTCGCCATGGCTTATTACGTCATCAATTATTCCAAACTTCGTATCTGGGAGTTCGTGGAGTACAGCAAGATGATCTATCTCGACGGAGACATCCAAGTGTTTGATAACATAGATCACCTGTTTGATCTGCCAAATGATTACTTCTATGCTGTGATGGACTGTTTCTGCGAGAAAACATGGAGCCATACCCCTCAGTACCAGATTGGGTACTGCCAGCAATGCCCCGATAAGGTTCAATGGCCATCTGAATTAGGACCCAAACCTCCACTCTATTTCAACGCTGGCATGTTCGTCTATGAGCCGAGCCTCGACACCTACCATGACCTCCTCAAAACCGTCCAGGTCACCAAACCTACGTCCTTCGCCGAGCAGGATTTCCTGAACATGTACTTTAAGGATAAGTATAAGCCCATACCCAACATCTACAACCTGGTGCTGGCCATGCTTTGGCGTCATCCTGAGAACGTTGACCTTCACAAAGTGAAAGTGGTTCACTACTGTGCTGCGGGTTCGAAACCATGGAGGTACACAGGGAAGGAGGAAAACATGGAGAGGGAAGACATAAAGATGCTGGTGAAGAAGTGGTGGGACATATACGAGGATGAGACGTTGGACTATGTGGGTCCAGTGAATGTGGAGAGGATCAAGGAGGCGTTATCGGAGGCTCGTTCTGTTCGACTGGTTCGAGCTCCATCTGCTGCTTAG 984 0.5112 MAPDITTAAANAAASQAKAKGKSRAFVTFLAGNGDYVKGVVGLVKGLRKVKSKYPLVVAILPDVPPEHRQILVAQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPNDYFYAVMDCFCEKTWSHTPQYQIGYCQQCPDKVQWPSELGPKPPLYFNAGMFVYEPSLDTYHDLLKTVQVTKPTSFAEQDFLNMYFKDKYKPIPNIYNLVLAMLWRHPENVDLHKVKVVHYCAAGSKPWRYTGKEENMEREDIKMLVKKWWDIYEDETLDYVGPVNVERIKEALSEARSVRLVRAPSAA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1517 327 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 299 IPR029044 -
Bisa07g1517 327 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 297 IPR029044 -
Bisa07g1517 327 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
Bisa07g1517 327 FunFam Hexosyltransferase 22 300 - -
Bisa07g1517 327 CDD GT8_Glycogenin 24 294 - -
Bisa07g1517 327 PANTHER GLYCOGENIN SUBFAMILY MEMBER 13 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1517 Bisa-ChrBisa07 38245620 38246992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1517 1 327 Glycosyltransferase AT1G56600 74.777 0.0 529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g1250 03 16921345 16922751 Bisa07g1517 07 38245620 38246992 CCT
Bisa07g1517 07 38245620 38246992 Bisa07g1517 07 38245620 38246992 ECH
Bisa03g1111 03 15115392 15116745 Bisa07g1517 07 38245620 38246992 ECH