Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1425 ATGGCATACCTTCCACGCAACGAGAAAAAGTCAATTGCCGAGTCACATGGGACTTTGGAGTACCGGTTAAGATTGAGGTTGCTCCTGCTCTTTCAAGAGCATCTGGAAGGAACCAACTTGCGTTCTTCGCAATCTGTTATCTTCTTCAATCCCATCCATTCCGCTTCTATCGCTGATCTGAGATTTTGGAAGTCCTCTCCCTCTCTCTATCTCATTCATATTCATATGTCACACGCTCCACAAACCCTAATGGCCAACGACTCCGAACCTGATGATGGAACTCCTCCACCAGGTCCTCTTTCTCCCCGGACCCCAGACCCTGATTCTCCCAACGCCATCAAGAATCCGGATACGACCCGAATTCCGAGTCTCCTCCATCTTTCGTTCAATCAGGATTCCGGGTGCTTCGCTGCGGGCACGGACAATGGTTTCCGGATCTACAATTGCGATCCGTTCCGCGAGATCTTTCGGCGAGACTTTGGTACGGGCGGTGGAATTGTATTAGTTCAGATGCTGTTTCGGTGCAACATACTTGCGTTCGTCGGTGGTGGAGCTGACCCAATTTACCCAAGTAATAAAGTGATGATTTGGGACGACCATCAGTCCAGGTGCATCGGCGAGCTATCGTTTCGGTCGGAGGTCAAAGGGGTTCGTCTTAGAAGGGACAGAATAGTGGTGGTTCTGGTGCATAAGATATTTGTATATAATTTCGCAGATCTTAAAGTGTTGCACCAAATTGAGACAACGGCGAACCCAAAGGGACTTTGTGAGGTTTCGCATGTTTCAGGGACAATGGTGTTGGTCTGTCCTGGGTTGCAGAAGGGTCAAGTGAGGGTCGAGCATTATGCCACAAAACGGACTAAGTTTATAATGGCGCACGATTCTAGAATAGCTTGCTTCGCGCTCACGCAGGATGGGAGGTTGCTTGCCACCGCAAGCAGCAAGGGAACTCTGGTTAGGATTTTCAATACCTTGGACGGCTCATTGCTCCAAGAGGTACGGAGAGGTGCAGACCGGGCAGAGATATATAGCCTTGCTTTTTCTGCTACTGCACAGTGGTTAGCTGTCTCAAGTGACAAAGGAACTGTTCATGTCTTCAACCTGAAGGTTGATTCAGGACTATTGGGCCATGACAGAGTGCATAGTGCGTCTGAATCTAATCCTGCTAACCCATCAGCAGTTTCATCTCTTTCATTTATTAAAGGTGTGCTGCCTAAGTATTTTAGCTCAGAATGGTCTGTGGCTCAGTTTCGCTTGCATGAAGGTTTGCAATATATTGTTGCCTTTGGCCACCAGAAGAACACAATCGTAATACTTGGGATGGATGGAAGCTTCTACCGATGCCAGTTTGACCCGGTAAATGGGGGAGAGATGAGCCAAGTTGAATATTACAACTTCTTGAAGCCAGAAGAAACATTCTAG 1422 0.4789 MAYLPRNEKKSIAESHGTLEYRLRLRLLLLFQEHLEGTNLRSSQSVIFFNPIHSASIADLRFWKSSPSLYLIHIHMSHAPQTLMANDSEPDDGTPPPGPLSPRTPDPDSPNAIKNPDTTRIPSLLHLSFNQDSGCFAAGTDNGFRIYNCDPFREIFRRDFGTGGGIVLVQMLFRCNILAFVGGGADPIYPSNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLVHKIFVYNFADLKVLHQIETTANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYATKRTKFIMAHDSRIACFALTQDGRLLATASSKGTLVRIFNTLDGSLLQEVRRGADRAEIYSLAFSATAQWLAVSSDKGTVHVFNLKVDSGLLGHDRVHSASESNPANPSAVSSLSFIKGVLPKYFSSEWSVAQFRLHEGLQYIVAFGHQKNTIVILGMDGSFYRCQFDPVNGGEMSQVEYYNFLKPEETF 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1425 473 SUPERFAMILY WD40 repeat-like 122 370 IPR036322 GO:0005515
Bisa07g1425 473 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 122 466 - -
Bisa07g1425 473 Pfam WD domain, G-beta repeat 336 367 IPR001680 GO:0005515
Bisa07g1425 473 SMART WD40_4 283 323 IPR001680 GO:0005515
Bisa07g1425 473 SMART WD40_4 114 148 IPR001680 GO:0005515
Bisa07g1425 473 SMART WD40_4 326 367 IPR001680 GO:0005515
Bisa07g1425 473 Gene3D - 118 453 IPR015943 GO:0005515
Bisa07g1425 473 MobiDBLite consensus disorder prediction 83 117 - -
Bisa07g1425 473 MobiDBLite consensus disorder prediction 92 106 - -
Bisa07g1425 473 FunFam Autophagy-related protein 18a isoform A 122 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1425 Bisa-ChrBisa07 36829215 36833388 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0460 03 5775414 5776535 Bisa07g1425 07 36829215 36833388 CCT
Bisa07g1425 07 36829215 36833388 Bisa07g1425 07 36829215 36833388 ECH
Bisa03g0359 03 4602220 4608296 Bisa07g1425 07 36829215 36833388 ECH