Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1207 ATGGAGTCGAAGCTCTATCGGAAAATCGCTTCGATGCAAAGTGCGATTGCGAGCAGATTTTACTACACTAGCAGGACCAAGAAACCCACTCTCTACTCCAAAATCAGTCCAATTGGGAGTCCTAGCACGAGCGTGGTACCTGAGCTTGACAATTGGATCTATAAGGGGAACAAGATCCGCGTCGCCGAGCTTCAGCGTATCATTCGCGATCTTCGCAAGCGCAGGAGGTTCACCCAAGCTCTAGAGGTATCTGAGTGGATGAATAAGAATGGTGTATGCATATTTTCACCTACTGAACATGCGGTGCATTTGGATCTGATGGGCAAAGTTCATGGATTTCGTTCTGCAGAAAAATATTTTAATAGCTTGAAGGACCAAGATAAAAATGATAAGACATATGGTGCTCTCTTGAATTGCTATACCCGGCAGTTGCAAACTGATAAGGCCCTCTCCCATCTGCAGAAAATGAGGGATTTGGGGTTTGCTTCATCACCTCTAACTTACAATGATATTATGTGTCTATACACTAATATTGGTCAGCATGAGAAGGTCCCAGCTGTGCTGAATGAGATGCAAAAGAATCAAGTTCTGCCTGATAACTTCTCCTACAGAATATGTATCAATTCATATGGTGTGAGGTCTGATATCGATGGAATGGAAAGAACATTAAAAGAGATGGAAAACCAATCACACATTGTCATGGACTGGAACACTTATTCTGTCGTGGCTAATTTCTACATAAAAGCAGGGCTTACAAGTAAGGCGGTTGATGCCCTGAAGAAATCAGAGGAGATGCTAGATAAGAAAGATGGCCTAGGGTACAATCATCTTATTTCCCTTTATGCCCGTCTAGGAGAAAAGACTGAGGTTATCAGATTGTGGGAACGGGAGAAGAGTGATTGCAAGAGGTGCCTAAACAGGGATTTCATTACCATGTTAGAATCTCTTGTAAGGCTTGGTGAGCTTGATGAAGCTGAGAAAGTACTGAAGGAGTGGGAGTCCTCTGGCAATAGTTATGAATCTCGAATCCCACATGTTGTCATCATTGGGTACTCAGAAAAAGGTTTGCATGAGAAAGCGGTAGCCATGCTTGAAAGCTTGCAGAAGAGGGGAAAGGCCACTATGCCAAACAGTTGGAGTGTAGTGGCAAGTAGATACTTGCGTGATGGTGAGATGGAGAATGCAGTGCGTTGCTTAAAAGCAGCCCTCTATGTGGAAAATAAAGGATGGAAGCCTGATCGCAAGGTGATATCGGGCATACTGAGTTGGCTTGGTGATAACGGCAGTGTTGAAGATGTGGAAGCTTTGGTGGGATCATTAAGAAATATTATCCCAGTGAACAAACCAATGTATCTTGCCCTAATCAAGGCTTATATAAGAAATGGTAAACCAGTGGATGGGCTCTTGGATCACATGAAGAAAGATAACATTGAAGAAGATGAGAAAATAAAGGAAATTCTTAATGTGAGGAAGACATAA 1479 0.428 MESKLYRKIASMQSAIASRFYYTSRTKKPTLYSKISPIGSPSTSVVPELDNWIYKGNKIRVAELQRIIRDLRKRRRFTQALEVSEWMNKNGVCIFSPTEHAVHLDLMGKVHGFRSAEKYFNSLKDQDKNDKTYGALLNCYTRQLQTDKALSHLQKMRDLGFASSPLTYNDIMCLYTNIGQHEKVPAVLNEMQKNQVLPDNFSYRICINSYGVRSDIDGMERTLKEMENQSHIVMDWNTYSVVANFYIKAGLTSKAVDALKKSEEMLDKKDGLGYNHLISLYARLGEKTEVIRLWEREKSDCKRCLNRDFITMLESLVRLGELDEAEKVLKEWESSGNSYESRIPHVVIIGYSEKGLHEKAVAMLESLQKRGKATMPNSWSVVASRYLRDGEMENAVRCLKAALYVENKGWKPDRKVISGILSWLGDNGSVEDVEALVGSLRNIIPVNKPMYLALIKAYIRNGKPVDGLLDHMKKDNIEEDEKIKEILNVRKT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1207 492 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 129 163 IPR002885 -
Bisa07g1207 492 NCBIfam pentatricopeptide repeat 311 336 IPR002885 -
Bisa07g1207 492 NCBIfam pentatricopeptide repeat 167 199 IPR002885 -
Bisa07g1207 492 Gene3D Tetratricopeptide repeat domain 301 404 IPR011990 GO:0005515
Bisa07g1207 492 Gene3D Tetratricopeptide repeat domain 405 488 IPR011990 GO:0005515
Bisa07g1207 492 FunFam Pentatricopeptide repeat-containing protein mitochondrial 61 272 - -
Bisa07g1207 492 Coils Coil 322 342 - -
Bisa07g1207 492 Pfam PPR repeat 132 161 IPR002885 -
Bisa07g1207 492 Pfam PPR repeat 311 336 IPR002885 -
Bisa07g1207 492 Pfam PPR repeat 274 296 IPR002885 -
Bisa07g1207 492 Pfam PPR repeat 346 371 IPR002885 -
Bisa07g1207 492 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 164 198 IPR002885 -
Bisa07g1207 492 PANTHER OS12G0527900 PROTEIN 24 481 - -
Bisa07g1207 492 Coils Coil 61 81 - -
Bisa07g1207 492 Gene3D Tetratricopeptide repeat domain 61 300 IPR011990 GO:0005515
Bisa07g1207 492 Pfam PPR repeat family 167 210 IPR002885 -
Bisa07g1207 492 SUPERFAMILY TPR-like 117 436 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1207 Bisa-ChrBisa07 30635374 30637729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1207 3 455 EF-hand Containing Proteins AT1G02150 33.333 3.68e-82 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1207 07 30635374 30637729 Bisa07g1207 07 30635374 30637729 ECH