Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0957 ATGACGACGGAGGGCAACTTGAAATCTATGAATCAAGTTGAAGCTGTGGAAGATTTATCCACTAGGGTTTCTGATTTCTCCCTTGGCGACCTGATGCCCAATTCTCCTCCGGGCGATCGGAAGATTGGTAATCAGAGGGATTATGTTATCAAGGACAAGGAGTATACTGGTTCTTTCAACACTGTTGACCTTGAAGGGCATTTTAGGAACGATTCCCCGTTGTATCCTGTACTATCTGAAGGTAAATTAGAAAATAATAAAGAGAACATGGCAACAACTGGTGATATTAAGAAGAGAGGAAAGTACTTCTATTATGATTCTCCACTGTATGAAGATACAGGAGTTTGGATACCAGTTTCAGTTCCACCTATGTTGGAAGACAACCACGGGGAGCGGGCTAGAGGTTTTTGCTCAAATGGTGGCTGTTTTCCCGAGGGTGACTTGGGGTGGAACCAATACCTTGGAGAAGAAAAGGAATTGACTATGTGGGATGTGCTGGTAGAAATGTTGCTCACTGCCCGGGGAAAAGTGACTTCTCTAGCTTCAGGAGACATTCACAAGTGTAACTTTTCATGGATATCAAGCCATGTACTTGAACAAGCTTGGAAAGAGATGGCACAAACTCTTACAGAGGTCAACTATGGTAATGTGAAGGAATTGCTTGACGCAGAGCCCCCAAAATGGTTGCCTGATAGCTCTTCTTCTTCTTGTATGCTTTGTGGTGTGCGGTTTCATCCTATCATGTGTTCCCGGCATCACTGCCGGTTTTGTGGAGGAATATTTTGTGGTGAATGCTCCAAAGGACGGAGCTTGTTGCCAGTCAAATTTCGAGTCTCTGATCCCCAACGAGTCTGTGATGTATGTTGGGTCCGGTTAGAGTCTATACAACCATATTTAATGGATCAGGTTAGTAATGCGGCCCAAGTGCCAACACAGGACCTGACAGACCTCAGCACTCTGAGGTCATGGGTTAATTTTCCTTGGGGACGGTCCATGGAATATGAAATTTATAAGGCAGCTAACACTATCAAGGCTTATAATCAGGTTGGTTCTTTGAAACCTGAGAAGTCAATTCCAGAATTCATTCTACGACAAGCAAAAGGCCTTGCAATTATCACTGTGGTGAAAGTAGGAGTTGTGGTTACCTACAATATTGGAACGGGACTAGTGGTTGCACGTAGGGAAGATGGTTCATGGTCTCCACCATCTGCTATTTCCACATTTGGTGTTGGGTGGGGAGCTCAGGCTGGAGGAGAGTTGACGGACTACATAATTGTTCTGAGAACGACTGATGCGGTGAAGACATTTAGCGGTAATGCACATCTTTCAGTTGGAGCCGGAGCAAGTGCTGCAGTTGGAAGCATTGGAAGGGCAGTTGAAGCTGATGTTCGAGCTGGGGACGGTGGTCATGCCACTTGTTACACGTACAGCTGCAGTAAAGGTGCATTTGTTGGATGTTCACTGGTAGGTGGTATTGTCACCACTCGATGGCAAGAAAATTCCCGTTTCTATGGCAGCCAGTCTTTAATTGCGACCGACTTGCTTCTCGGCTCGTTGCCTAGGCCGCCTGCTGCTGCCATTCTCTACGGTGCTCTTGAGGATCTGTATTGGAAGCTTGATGGTTGA 1626 0.4588 MTTEGNLKSMNQVEAVEDLSTRVSDFSLGDLMPNSPPGDRKIGNQRDYVIKDKEYTGSFNTVDLEGHFRNDSPLYPVLSEGKLENNKENMATTGDIKKRGKYFYYDSPLYEDTGVWIPVSVPPMLEDNHGERARGFCSNGGCFPEGDLGWNQYLGEEKELTMWDVLVEMLLTARGKVTSLASGDIHKCNFSWISSHVLEQAWKEMAQTLTEVNYGNVKELLDAEPPKWLPDSSSSSCMLCGVRFHPIMCSRHHCRFCGGIFCGECSKGRSLLPVKFRVSDPQRVCDVCWVRLESIQPYLMDQVSNAAQVPTQDLTDLSTLRSWVNFPWGRSMEYEIYKAANTIKAYNQVGSLKPEKSIPEFILRQAKGLAIITVVKVGVVVTYNIGTGLVVARREDGSWSPPSAISTFGVGWGAQAGGELTDYIIVLRTTDAVKTFSGNAHLSVGAGASAAVGSIGRAVEADVRAGDGGHATCYTYSCSKGAFVGCSLVGGIVTTRWQENSRFYGSQSLIATDLLLGSLPRPPAAAILYGALEDLYWKLDG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0957 541 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 231 293 IPR017455 -
Bisa07g0957 541 SMART fyve_4 223 294 IPR000306 GO:0046872
Bisa07g0957 541 FunFam Zinc finger family protein 217 299 - -
Bisa07g0957 541 PANTHER SH3YL1 PROTEIN 192 539 - -
Bisa07g0957 541 SUPERFAMILY FYVE/PHD zinc finger 226 304 IPR011011 -
Bisa07g0957 541 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 217 304 IPR013083 -
Bisa07g0957 541 CDD SYLF_FYVE 334 535 - -
Bisa07g0957 541 Pfam Las17-binding protein actin regulator 409 533 IPR007461 -
Bisa07g0957 541 Pfam FYVE zinc finger 227 292 IPR000306 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0957 Bisa-ChrBisa07 24521678 24525186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0957 228 293 EF-hand Containing Proteins AT3G14270 35.211 7.61e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0957 07 24521678 24525186 Bisa07g0957 07 24521678 24525186 ECH