Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0706 ATGGCCTCATCGGAGATCGAGGTGGTATCACCGGACTCCAAAACCCCGAGAATTCCCGATAAACCTCCCATAGTCGACGTGTACTCTGCCTGTTCGTATGGGGACTTCGAGAAATTGAGGAAGTTTGTGGAAGAAGATGGTGCCTCCGTTTCTCTCCCTGATGTCAATGGCTATTATGCTCTTCAGTGGGCATCCCTTAGCAACTTCCCAAATATTGTGCAGTATGTCATTAAGCATGGGGCCGATGTCAACGCCACTGACCTCATGCAACAGACAGCACTACACTGGGCAGCAGTTCGTGGTGCAACTACAGTGGCTGATTTGCTCTTGGAGAATGGTGCTCGGATGGAGGCTGCTGATATGCATGGATACAGGGCAGTTCATGTTGCTGCTCAATATGGGCAAACATATTTCTTAAATCACATCATTGTAAAGTACAATGCTGATTTTGATGCGCCAGATAATGAGGGACGAAGTCCTCTTCACTGGGCTGCATATAAGGGATTTGCTGATACAATTAGATTGCTTCTATTTCGAGATGCATGCCAAGGGAGACAAGATAAAGATGGTTGTACGCCATTGCATTGGGCTGCACTAAGTGGAAACGCAGAGGCATGCACTGTGCTTGTACATGCAGGCACAAAGAAGGAACTAATGGTGAAGGACAATGCTGGGTTCACCCCTGTGCAGCTTGCATATGATAAAGGTCATCGGCATGTCGCCCTTTTCCTTTCTAATCAACAGCAGGCTCATAAAAAGCGCTGGAGAGACAAAATTTGTGGTGGGAGGCTGAAAGAAATTGGTTATGCTCCCATCCTATTGTGTGTTATAGTCATTGAGATGATCCTCTTCATCAACTCAGTTGTCGCAGCTTCTAGTTTTCAAAAGATTACTGTTGTCATTGGACTTTGGGCATGGACAGCTCTTTCTCTGGCATTTGCTTCCCTTATTATGTTCTATAGGTGTAGCAGTAAAGATCCCGGTTATATAAAACGACCAGGAGATTTGGGTACTCATAGTGATATGGAGGATGCTTTATTGAATATTGATCTGAATAGCTCCTCTGTTTGGACAGGAAACTGGTCTCAACTTTGCCCTTCCTGCAAGATAATAAGACCTGTCCGATCTAAGCATTGTTCTACCTGTAAGCGTTGTGTTGAACAGTTTGACCACCATTGCCCCTGGATATCTAACTGTGTGGGAAGGAGGAACAAAAGGGATTTCTTTATTTTTGTCTTCTTGGCAACTTTGACTTCATTCATTAGCGGTGCTGTTGTGGTTCAAAGGTTTTGGACAGAAAAACTAACATGGCCAGCGGGAGAAACAAGGATCCATCATGTGTTAGTACAATATCCAGGTGCCGTTGCATTTATGGTGGTGGACTCTGTTATTTTCATCGCTGCTTTAACTTTGTCGACGACACAGGCTTCCATGATAGCTCGGAATATCACCACAAATGAAGTTGCAAACTCCTCTCGCTATTCGTATCTTCGTGGTCCTGATGGGAAGTTCAGAAATCCATATAACCATGGCTGTTGGAAAAATTGTTCTGATTTTGTTATTCAGGGCTATACAGATGATGACGACAGTGCTTGGCCTCCATTACAGCAGGTGGCCACTTAG 1623 0.4473 MASSEIEVVSPDSKTPRIPDKPPIVDVYSACSYGDFEKLRKFVEEDGASVSLPDVNGYYALQWASLSNFPNIVQYVIKHGADVNATDLMQQTALHWAAVRGATTVADLLLENGARMEAADMHGYRAVHVAAQYGQTYFLNHIIVKYNADFDAPDNEGRSPLHWAAYKGFADTIRLLLFRDACQGRQDKDGCTPLHWAALSGNAEACTVLVHAGTKKELMVKDNAGFTPVQLAYDKGHRHVALFLSNQQQAHKKRWRDKICGGRLKEIGYAPILLCVIVIEMILFINSVVAASSFQKITVVIGLWAWTALSLAFASLIMFYRCSSKDPGYIKRPGDLGTHSDMEDALLNIDLNSSSVWTGNWSQLCPSCKIIRPVRSKHCSTCKRCVEQFDHHCPWISNCVGRRNKRDFFIFVFLATLTSFISGAVVVQRFWTEKLTWPAGETRIHHVLVQYPGAVAFMVVDSVIFIAALTLSTTQASMIARNITTNEVANSSRYSYLRGPDGKFRNPYNHGCWKNCSDFVIQGYTDDDDSAWPPLQQVAT 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0706 540 Gene3D - 20 142 IPR036770 -
Bisa07g0706 540 Gene3D - 143 276 IPR036770 -
Bisa07g0706 540 Pfam Ankyrin repeats (3 copies) 128 216 IPR002110 GO:0005515
Bisa07g0706 540 Pfam Ankyrin repeats (3 copies) 29 119 IPR002110 GO:0005515
Bisa07g0706 540 ProSiteProfiles Ankyrin repeat region circular profile. 56 87 - -
Bisa07g0706 540 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Bisa07g0706 540 ProSiteProfiles Ankyrin repeat profile. 189 221 IPR002110 GO:0005515
Bisa07g0706 540 Pfam DHHC palmitoyltransferase 363 490 IPR001594 GO:0016409
Bisa07g0706 540 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Bisa07g0706 540 FunFam S-acyltransferase 143 251 - -
Bisa07g0706 540 FunFam S-acyltransferase 12 142 - -
Bisa07g0706 540 ProSiteProfiles DHHC domain profile. 363 413 - -
Bisa07g0706 540 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Bisa07g0706 540 SMART ANK_2a 89 118 IPR002110 GO:0005515
Bisa07g0706 540 SMART ANK_2a 189 218 IPR002110 GO:0005515
Bisa07g0706 540 SMART ANK_2a 122 152 IPR002110 GO:0005515
Bisa07g0706 540 SMART ANK_2a 56 85 IPR002110 GO:0005515
Bisa07g0706 540 SMART ANK_2a 224 253 IPR002110 GO:0005515
Bisa07g0706 540 SMART ANK_2a 156 185 IPR002110 GO:0005515
Bisa07g0706 540 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Bisa07g0706 540 ProSiteProfiles Ankyrin repeat profile. 122 155 IPR002110 GO:0005515
Bisa07g0706 540 ProSiteProfiles Ankyrin repeat region circular profile. 156 177 - -
Bisa07g0706 540 SUPERFAMILY Ankyrin repeat 28 246 IPR036770 -
Bisa07g0706 540 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Bisa07g0706 540 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 24 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0706 Bisa-ChrBisa07 18551849 18582633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0706 27 247 Miscellaneous Gene Families AT5G60070 26.087 1.36e-11 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0706 07 18551849 18582633 Bisa07g0706 07 18551849 18582633 ECH