Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0701 ATGCGTTCACGTCGTGCTCTGTTTTGCTGCCCTGGGTGGCTTCTCTGGTCTAATGTGCATGGCGTCGCCGGTCGAGTCTTCAGGGATGCGGGGATGCAGTTTAGTCCCAGTAATTATTTTCTCGCACGTGTGACTGCCTACCGCTCCCATTTAGATTTCTTAGTCGCGCTCGCACGCCTGCATTCGTCGCCTCTCTCGTACGTCTTTGCTCTTCTCCTCCCACTGTTTCTCAGGAGTGACCAGAGCATAAAGATGGAGCTGAATAGCATTAAAGATGCATTTGATCGTGTATCTAAGAAACAAAAGTTATCTTCTTCCAAGTCCCAAGAAGTCATTGATCAGGTGGGGCTCAAAATTGAAGAGGCTTTAGCAAAATTCCAGTCAGCTCATGACTCCCCAGCCACTGCTGACCAAAAATCTATTCTTACAGAACTGAAGTCTAAGCTTAATGCTATTGGAGCACTTCAACAGTTAGAAGGACCACAGAAAGAACTGAACATAAGTCTTACCAAGTACCAAAAACTCCTGGAAAAATCCTTAAATCCTGATGTATCCAAGGCTTACAGAAATGTTGACTTCGACTTTCACATTCTGAATCAGATTATTGCAAACCATTTTTACCGTCAAGGTTTATTTGATCTTGGAGATAGCATCATAAATGAGGCTGGGGAGCCTAATGCAACTGTACTAAGATCTCAGTTCTTGGAAATGCATCAAATTCTTGAAGCTATGAGGGTTAGGAATCTTCAGCCTGCTCTCACATGGGTCTCTGCCAATCGAGAGAAATTAGTCCAGAATGGTTCCAATCTTGAGCTAAAGCTTCACACCTTGCAGTTTGTAGAGGTCTTGCTAAATGGAACTCGAGCTGATGCCTTAAAATATGCCCGAACTTATCTTGCTCCTTTTGCTTCTCTCCACAAGGATGAGTTCCAAAAGCTTATGGGTTGCCTCTTATATGCAGGAAGGCTTGACAGCTCCCCTTATTCTGAGTTGATATCTCCAATCCATTGGGAGATGACTACTGAAGAGCTGACTCGGCAGTTCTGCACTCTTTTGGGGCAGTCCTACCAGAGCCCACTAAGTGTGGCAGTTGCCGCTGGAGTTGAAGGGTTGCCTACACTCTTAAAACTGGCAAATGTAATGGCAGCAAAGAAGCAAGAATGGCAGACTATGAAACAATTGCCAGTGCCTGTAGAATTGGGGAAGGAATTTCAGTTTCATTCAATTTTCGTTTGTCCTGTGAGTAGGGATCAAGGGAGTGACGAGAATCCACCTATGCTGCTGCCATGTTTACATGTTCTTTGCAAGCAATCAATAATGAAGTTGTCGAAAAGCAGCACCCGAACGTTCAAATGTCCATACTGTCCAGTAGAAACCACAGTTGCACAATGCAGACAACTCTATTTCTGA 1410 0.4447 MRSRRALFCCPGWLLWSNVHGVAGRVFRDAGMQFSPSNYFLARVTAYRSHLDFLVALARLHSSPLSYVFALLLPLFLRSDQSIKMELNSIKDAFDRVSKKQKLSSSKSQEVIDQVGLKIEEALAKFQSAHDSPATADQKSILTELKSKLNAIGALQQLEGPQKELNISLTKYQKLLEKSLNPDVSKAYRNVDFDFHILNQIIANHFYRQGLFDLGDSIINEAGEPNATVLRSQFLEMHQILEAMRVRNLQPALTWVSANREKLVQNGSNLELKLHTLQFVEVLLNGTRADALKYARTYLAPFASLHKDEFQKLMGCLLYAGRLDSSPYSELISPIHWEMTTEELTRQFCTLLGQSYQSPLSVAVAAGVEGLPTLLKLANVMAAKKQEWQTMKQLPVPVELGKEFQFHSIFVCPVSRDQGSDENPPMLLPCLHVLCKQSIMKLSKSSTRTFKCPYCPVETTVAQCRQLYF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0701 469 SMART ctlh 233 290 IPR006595 -
Bisa07g0701 469 Pfam CTLH/CRA C-terminal to LisH motif domain 233 374 IPR024964 -
Bisa07g0701 469 Pfam RING-type zinc-finger 412 453 IPR027370 -
Bisa07g0701 469 CDD dRING_Rmd5p-like 410 458 IPR037683 -
Bisa07g0701 469 SMART toby_final6 286 380 IPR013144 -
Bisa07g0701 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 402 468 IPR013083 -
Bisa07g0701 469 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 233 290 IPR006595 -
Bisa07g0701 469 ProSiteProfiles Gid-type RING finger profile. 412 455 IPR044063 GO:0061630
Bisa07g0701 469 SUPERFAMILY RING/U-box 406 466 - -
Bisa07g0701 469 PANTHER MACROPHAGE ERYTHROBLAST ATTACHER-RELATED 80 468 IPR045098 GO:0004842|GO:0043161
Bisa07g0701 469 FunFam Regulator of gluconeogenesis Rmd5 404 468 - -
Bisa07g0701 469 SMART ring_2 412 455 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0701 Bisa-ChrBisa07 18392608 18405249 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0701 07 18392608 18405249 Bisa07g0701 07 18392608 18405249 ECH