Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0627 ATGGCTTCTCTCAATTTCTCCTATTCTTCAACGCCAGCTCTCTCGCGCCCACGTATTCTATGTAGGGCGTGCAAACACTTGAAATTGTTCAATGGGTTGCAATGCATGAACTCATCTGTTGTACGTGGACTTAGATCTGATTTGGCTTTTGTCCTGCTGGATTCCAAATTATCCTCAAGCAACAAGTTTGTTAGCGGAACCAAGGCAGCACTGATCTCTGGAGGAGGCAACCTTGTTTCTTATTTCAATGGCAATGATGTTAAGATACGGCCTGAAGCAATAGCATATGGAACTCTAGCAGCAGATACAGCAGTAACAAGTAATGGTTTTCCTGTTGATGATGACGAATTTAATTTGGACAGCCCCACAGAAGGCTTTTCTTCCATCCCTGAGGCTATTGAGGATATTCGCCAGGGAAAGATGGTATTGGTTGTAGATGATGAAGACAGGGAAAATGAAGGAGACTTGATAATGGCTGCACAGTTGGCCACACCTGAAGCTATGGCTTTTATTGTGAAGCATGGGACTGGGATAGTTTGTGTAAGCATGAAAGAGGAAGATTTGGAGAGATTGGAACTTCCTTTGATGGTAGACAGTAAGGATAATGCTGAGAAACTTCGTACCGCATTCACTGTGACAGTAGATGCTAAACATGGTACTACCACAGGGGTGTCAGCTAGAGACAGAGCAACCACAGTCTTGGCTCTTGCATCCAGAGATTCAACACCAGCTGATTTCAATCGCCCAGGTCATATTTTTCCACTAAAATACAGAGAAGGTGGTGTCTTGAAGAGAGCTGGACATACAGAGGCTTCAGTTGATCTTGCTGTACTTGCTGGTTTGGAACCTGTGGCAGTTCTATGTGAGGTTGTAGATGATGATGGTTCCATGGCTAGATTGCCAAAGCTTCGCCTGTTTGCAGAGTGTGAAAACTTGAAAATTATTTCTATTGCTGACTTAATAAGATATAGAAGGAAGAGAGATAAATTAGTTGATCATACCAGTGCTGCAGAAATACCTACAATGTGGGGGCCATTCACAGCTTACTGTTATAGGTCACATATAGACGGGATGGAACATATTGCAATGGTAAAGGGTGACATTGGAGATGGAAAAGATGTTCTTGTGAGAGTACACTCTGAGTGTCTCACTGGAGACATATTTGGATCTGCCAGATGCGACTGTGGGAATCAGCTTGCACTTGCAATGCAGCAGATTGAGGCTGCTGGAAGGGGTGTACTGATATATCTCCGTGGACATGAAGGAAGAGGTATTGGATTGGGCCACAAGCTTCGTGCCTATAACCTACAGGATGATGGACGGGATACCGTAGAAGCCAACGAGGAGTTGGGATTGCCTGTCGACTCAAGGGAATACGGCATTGGCGCACAGATATTGAGGGACTTGGGTGTTCGATCGATGAAGCTGATGACAAACAATCCAGCAAAATATGTCGGGCTCAAAGGTTATGGTTTGACAATATCGGGTAGGATCCCATTGGTAACCCTTATCACAAAGGAGAACAAGAGATATTTGGAGACAAAACGTGCCAAAATGGGACACGTTTATGGCTTGGAATTTAATAGTCAAATGAGCAATTATGAGAGTAGCAATGGTAAAGCCAGTGTTGATGATTCTAATGCTGTTCCTGGCTCATAA 1659 0.4394 MASLNFSYSSTPALSRPRILCRACKHLKLFNGLQCMNSSVVRGLRSDLAFVLLDSKLSSSNKFVSGTKAALISGGGNLVSYFNGNDVKIRPEAIAYGTLAADTAVTSNGFPVDDDEFNLDSPTEGFSSIPEAIEDIRQGKMVLVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKEEDLERLELPLMVDSKDNAEKLRTAFTVTVDAKHGTTTGVSARDRATTVLALASRDSTPADFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEVVDDDGSMARLPKLRLFAECENLKIISIADLIRYRRKRDKLVDHTSAAEIPTMWGPFTAYCYRSHIDGMEHIAMVKGDIGDGKDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLIYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLTISGRIPLVTLITKENKRYLETKRAKMGHVYGLEFNSQMSNYESSNGKASVDDSNAVPGS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0627 552 Hamap GTP cyclohydrolase-2 [ribA]. 329 525 IPR000926 GO:0003935|GO:0009231
Bisa07g0627 552 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 125 521 IPR016299 GO:0009231
Bisa07g0627 552 Gene3D DHBP synthase 116 330 - -
Bisa07g0627 552 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 117 330 - -
Bisa07g0627 552 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 131 323 IPR000422 GO:0008686|GO:0009231
Bisa07g0627 552 Pfam GTP cyclohydrolase II 336 499 IPR032677 -
Bisa07g0627 552 PANTHER GTP CYCLOHYDROLASE II-RELATED 124 524 - -
Bisa07g0627 552 SUPERFAMILY YrdC/RibB 125 327 IPR017945 -
Bisa07g0627 552 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 127 324 IPR000422 GO:0008686|GO:0009231
Bisa07g0627 552 NCBIfam GTP cyclohydrolase II 335 522 IPR000926 GO:0003935|GO:0009231
Bisa07g0627 552 SUPERFAMILY RibA-like 329 500 IPR036144 -
Bisa07g0627 552 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 124 328 IPR000422 GO:0008686|GO:0009231
Bisa07g0627 552 Gene3D GTP cyclohydrolase II 331 502 IPR036144 -
Bisa07g0627 552 FunFam Riboflavin biosynthesis protein RibBA 331 502 - -
Bisa07g0627 552 CDD GTP_cyclohydro2 330 521 IPR000926 GO:0003935|GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0627 Bisa-ChrBisa07 15497210 15509335 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0627 07 15497210 15509335 Bisa07g0627 07 15497210 15509335 ECH