Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2081 ATGTATGTAGAAATTCTTCTAGTCAATGGTCGTGCGTTTCTAATCGAAGCTGGGGCAGTTACGATGTCGTCTCTCAGTAGAGAATTGGTGTTCTTGATTTTGCAGTTTCTGGATGAGGAAAAATTCAAAGAGACTGTTCACAAGTGGGGCTATTGCCATTTAAGTTTGCTTGAACAGGAGTCTGGGTTTTTCTTTAACATGAAATATTTTGAGGATGAAGTACACAATGGCAATTGGGATGAGGTTGAAAGATATCTTTCTGGTTTCACAAAAGTTGATGATAATCGGTATTCAATGAAGATATTTTTTGAGATTAGGAAGCAGAAGTACCTCGAGGCATTAGATAAGCACGATAGGTCCAAGGCTGTAGAAATATTAGTGAAGGATTTGAAGGTTTTTTCTACGTTTAATGAAGACCTATTCAAGGAAATCACACAGCTCTTGACATTGGAGAACTTTAGGGAAAATGAACAATTGTCAAAATATGGTGATACGAAGTCTGCAAGGGCAATCATGTTGGTTGAGCTTAAAAAGCTGATTGAAGCAAATCCCTTATTCCGTGACAAATTGCAGTTTCCCAACCTTAAAAACTCTAGGCTACGGACTCTCATCAATCAAAGTTTGAATTGGCAGCATCAACTCTGTAAGACCCCACGGCCAAATCCAGATATAAAAACTCTGTTTGTGGATCACTCATGTGGACAACCAAATGGTGCACGGGCTCCATCACCAGCAAATAATCCACTCCTTGGATCCTTACCAAAGGCTGGAGGGTTTCCTCCGCTTGGTGCACATGGGCCTTTTCAACCTGCGCCAGCACCAGTGCCAACACCCCTAGCAGGCTGGATGTCAAATCCTACCACTGTAGCTCATGCTGCAGTTTCTGGAGGAGGAGCTATAGGCCTTGGTGCTCCATCAATCCCTGCTGGCTTGAAGCACCCAAGGACCCCTCCAACTAACCCATCTGTGGACTACCCATCTGGAGATTCTGATCACGCATCTAAGAGAACAAGGCCAATGGGAATGTCAGATGAGGTGAATTTGCCTGTTAATGGGTTGCCAGCAGCATTCCCAAGTCATGGGCACAGCCAACCTTTTAATGCACCTGATGACTTACCAAAGATTGTTACACGAACTCTGAATCAGGGTTCATCTCCTATGAGCATGGACTTTCATCCAGTTCAACAGTCTTTACTTCTCGTTGGTACCAATGTGGGGGACATTGCTTTGTGGGAGGTGGGTTCTCGGGAGCGATTGGTCTTGAGGAACTTCAAAGTTTGGGATCTTAGTGCTTGTTCAGTGCCACTTCAGGCTGCTCTTGTCAAAGATCCAGGTGTTTCTGTCAGCCGTGTGATTTGGAGTCCTGATGGTACTTTATTTGGAGTTGCTTACTCAAGGCATATTGTTCAGATATACTCTTACCATGGTGGAGATGAAGTGCGGCAGCACCTGGAGATTGATGCTCATGTTGGTGGAGTGAATGATTTAGCATTTTCACACCCAAATAAGCAACTATGTGTCATAACCTGTGGTGATGATAAGACTATCAAAGTGTGGGATGCTGCTACTGGTGCAAAACAGTATACTTTCGAAGGTCACGAGGCTGCAGTCTATTCTGTTTGCCCTCATTATAAAGAAAACATTCAGTTCATATTTTCAACTGCATTAGATGGAAAGATAAAGGCATGGTTGTATGACAATTTGGGGTCTCGTGTTGATTATGATGCTCCCGGTCGTTATTGCACAACCATGGCTTATAGTGCTGACGGTACAAGGCTCTTTTCCTGTGGGACAACCAAAGATGGGGAATCCTCTATTGTTGAGTGGAATGAAAGTGAAGGAGCTGTCAAAAGGACTTATCAAGGATTCCGTAAACGGTCTATGGGTGTTGTGCAATTTGATACAACAAAAAATCGATTTTTGGCTGCTGGTGATGATTTCTCCATTAAATTCTGGGATATGGACAATGTTCAACTATTGACAACTGTTGATGCTGATGGAGGTTTACCTGGAAGCCCACGCATCCGTTTCAACAAGGATGGAACTCTCTTAGCTGTCTCTGCAAATGAGAATGGAATTAAAATTTTAGCCAATGCAGATGGCATAAGAATGTTACGGACATTAGAGAATTCGTTATACGAGGCATCAAGAACATCTGAAGCCATGGCAAAGCCAACAATAAATCCAATTTCTGCTGCTGTTGCAAGTAGTGCTGCACTTGCAGAGAGGGGCTCATCTGTTGTAGCTATTGCTGGAATGAATGGAGATGCCAGGAATATGGGGGATGTTAAACCTAGAATAACTGAAGAATCCAATGACAAGTCAAAGATCTGGAAGCTCACTGAAATCAATGAACCATCTCAATGTAGATCCTTGAAGCTACCAGAGAACCTGAGAGTAACTAAGATATCAAGATTGATATATACAAATTCTGGTAATGCTATACTGGCATTATCATCAAATGCCATTCATTTGCTCTGGAAATGGCAGCGAAGTGATCGCCATTCATCTGGAAAGGCCACTGCCAGTGTGTTTCCTCACTTGTGGCAACCATCAAGTGGTATCCTGATGACAAATGACATTTCTGACAGCAATCCTGAGGATGCTGTGCCCTGCTTTGCTCTCTCCAAAAATGATTCTTACGTAATGTCAGCATCAGGAGGGAAGATTTCCTTGTTCAATATGATGACCTTTAAGACAATGACTACTTTCATGCCTCCTCCACCCGCAGCAACCTTTCTTGCTTTCCATCCTCAGGATAACAATATCATTGCTATTGGGATGGATGATTCCACCATTCAGATATATAATGTCCGTGTGGATGAGGTTAAAAGTAAACTCAAGGGTCACACTAAAAGAATAACTGGCCTTGCTTTTTCTCATGCATTGAATGTGCTAGTCTCATCTGGGGCGGATGCTCAGCTTTGTGTGTGGAACACTGATGGATGGGAAAAGCAGAAGACTAGATTCTTGCAGCTTCCTGCTGGGAGGACTCCAACACCACAAGCAGAAACACGTGTACAGTTTCATCAGGACCAGATACACTTCTTGGTTGTACATGAAACTCAGCTTGCCATACATGAAACAGGAAAACTAGAATGTCTAAAGCAGTGGTTCCCAAGAGATTCTACTGCACCAATATCAGCTGCAACTTTCTCATGTGATAGCCAGCTCATATATGCCAGCTTTTTAGATGCAACTGTTTATGTATTCAGCGCTTCAAACCTCAGATTACGTTGTCGTATTAATCCTTCTGCTTATCTTCCTGCAAGTGTCAGCAGTTCCAATGTACAACCGCTTGTGGTCGCTGCACATCCACAAGAACCAAATCAGTTTGCTGTAGGATTGTCAGATGGTGGAGTTCATGTATTTGAGCCCCTGGAGTCTGAAGGCAAGTGGGGAGTGCCTCCACCCATTGAAAATGGGTCAGCAAGCAATGTGGTAGCTACTTCTGTTGGACTTTCTTCAGATCAAGCCCAGAGATAA 3486 0.4323 MYVEILLVNGRAFLIEAGAVTMSSLSRELVFLILQFLDEEKFKETVHKWGYCHLSLLEQESGFFFNMKYFEDEVHNGNWDEVERYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFSTFNEDLFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKTPRPNPDIKTLFVDHSCGQPNGARAPSPANNPLLGSLPKAGGFPPLGAHGPFQPAPAPVPTPLAGWMSNPTTVAHAAVSGGGAIGLGAPSIPAGLKHPRTPPTNPSVDYPSGDSDHASKRTRPMGMSDEVNLPVNGLPAAFPSHGHSQPFNAPDDLPKIVTRTLNQGSSPMSMDFHPVQQSLLLVGTNVGDIALWEVGSRERLVLRNFKVWDLSACSVPLQAALVKDPGVSVSRVIWSPDGTLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGAKQYTFEGHEAAVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRYCTTMAYSADGTRLFSCGTTKDGESSIVEWNESEGAVKRTYQGFRKRSMGVVQFDTTKNRFLAAGDDFSIKFWDMDNVQLLTTVDADGGLPGSPRIRFNKDGTLLAVSANENGIKILANADGIRMLRTLENSLYEASRTSEAMAKPTINPISAAVASSAALAERGSSVVAIAGMNGDARNMGDVKPRITEESNDKSKIWKLTEINEPSQCRSLKLPENLRVTKISRLIYTNSGNAILALSSNAIHLLWKWQRSDRHSSGKATASVFPHLWQPSSGILMTNDISDSNPEDAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHTKRITGLAFSHALNVLVSSGADAQLCVWNTDGWEKQKTRFLQLPAGRTPTPQAETRVQFHQDQIHFLVVHETQLAIHETGKLECLKQWFPRDSTAPISAATFSCDSQLIYASFLDATVYVFSASNLRLRCRINPSAYLPASVSSSNVQPLVVAAHPQEPNQFAVGLSDGGVHVFEPLESEGKWGVPPPIENGSASNVVATSVGLSSDQAQR 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2081 1161 ProSiteProfiles Trp-Asp (WD) repeats profile. 486 529 IPR001680 GO:0005515
Bisa06g2081 1161 ProSitePatterns Trp-Asp (WD) repeats signature. 507 521 IPR019775 -
Bisa06g2081 1161 Gene3D - 357 574 IPR015943 GO:0005515
Bisa06g2081 1161 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 22 1143 IPR027728 GO:0006355
Bisa06g2081 1161 MobiDBLite consensus disorder prediction 1143 1161 - -
Bisa06g2081 1161 Pfam WD domain, G-beta repeat 486 520 IPR001680 GO:0005515
Bisa06g2081 1161 Pfam WD domain, G-beta repeat 946 979 IPR001680 GO:0005515
Bisa06g2081 1161 SMART ctlh 63 121 IPR006595 -
Bisa06g2081 1161 FunFam Topless-related protein 3 766 1000 - -
Bisa06g2081 1161 ProSiteProfiles Trp-Asp (WD) repeats profile. 947 988 IPR001680 GO:0005515
Bisa06g2081 1161 Gene3D - 766 995 IPR015943 GO:0005515
Bisa06g2081 1161 ProSiteProfiles Trp-Asp (WD) repeats profile. 631 662 IPR001680 GO:0005515
Bisa06g2081 1161 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 947 979 - -
Bisa06g2081 1161 SUPERFAMILY WD40 repeat-like 377 563 IPR036322 GO:0005515
Bisa06g2081 1161 Gene3D - 1024 1158 IPR015943 GO:0005515
Bisa06g2081 1161 MobiDBLite consensus disorder prediction 308 341 - -
Bisa06g2081 1161 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 63 121 IPR006595 -
Bisa06g2081 1161 MobiDBLite consensus disorder prediction 1134 1161 - -
Bisa06g2081 1161 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 501 984 IPR011047 -
Bisa06g2081 1161 Gene3D - 575 718 IPR015943 GO:0005515
Bisa06g2081 1161 FunFam Topless-related protein 1 353 571 - -
Bisa06g2081 1161 SMART WD40_4 897 937 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 1031 1072 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 373 412 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 523 564 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 567 610 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 479 520 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 1085 1125 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 857 894 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 433 473 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 613 653 IPR001680 GO:0005515
Bisa06g2081 1161 SMART WD40_4 940 979 IPR001680 GO:0005515
Bisa06g2081 1161 SUPERFAMILY WD40 repeat-like 1005 1126 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2081 Bisa-ChrBisa06 64701199 64709858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2081 484 697 Miscellaneous Gene Families AT5G08390 24.201 5.09e-07 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g2081 06 64701199 64709858 Bisa06g2081 06 64701199 64709858 ECH