Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2073 ATGCCACGTGGCGAAAAATCAACGGCCATCCTAGCTCTAGCAACGGCTCCGTTTTGATTGCTCACAAATCTTGAAAAGAAAATGGCGCCGAGGTCGGGAAGAGGAAAATCGAATAAAGCTAAGGCAGAGAAGAAGAAGAAGGAGGAGAAAGCGTCAGTGCCTTCTCTTGTTGACATTAACGTCGTCACTCCGTACGATTCACAAATTGTGCTCAAGGGTATCTCTACTGATAAGATACTCGATGTAAAAAGGCTATTGGCCGTGAACGTGGAAACCTCTCATTTTACGAATTATTCTTTATCTCACGAGGTTAAAGGGCCGAGATTGAATGATAGAGTCGAGGTTGTTACTCTAAAGCCATGTATTCTAAGAATGGTTGAAGAGGATTACACAGAGGAAGCCCAAGCTATCGCACACGTGCGGCGACTTTTGGACATCGTGGCCAGCACAACCAGGTTTACGAAGCCCAAACGAGCCTTGACAAACACGGACTCCAAAGCTAAGAAAAACTGTAAGGCCCAACATAACAATAAGAGTAATTCAAGCCCACTAACGACGCCCAATGGCGAATGCCGCGTCGAGTCGCCGACGTCGGAGTCGCCGATCTCGGATGACGTCGGCATGGTGGCCATTCATCCGACGCCGAAACTTTCAGATTTCTACGAGTTCTTCTCTTTCTCTCAGCTCTCTCCTCCGATTCTACATTTGAAGAGATGTGAACTGAAAAATGGAGATGATAGAGGCAAACGCGACTACTTTCAGCTTCAGATTAAAATCTGCAATGGGAAGCTGATAGAAGTAGTTGCATCAGAAAAAGGGTTTTATACCGTAGGAAAGCAGTCACTTCAGAGCCATTCTTTAGTTGATCTTCTGAAACAGCTCAGCCGAGGTTTTGCCAACGCATATGGATCGTTGATGAAAGCTTTTGTGGAACATAATAAGTTTGGTAATCTTCCATATGGATTCCGAGCAAATACATGGCTTGTCCCTCCTTCTGTTGCTGAGTGTCCTTCAAACTTTCCTTCCTTACCTTCTGAGGACGAAAACTGGGGTGGTAATGGTGGTGGCCAGGGAAGAAATGGTGAACACGATCTTAAGCCATGGGCTAGAGATTTTGCAATATTGGCTTCTCTTCCTTGCCAAACTGAGGAGGAGAGGGTGGTCAGAGACAGAAAAGCTTTTCTACTTCACAGTCAATTTGTAGATACCTCAATATTTAAGGCTGTTGCAGCTATAAGGCATGTAATTGACTCAAAGTCTAATGGGGATAACAAATTGAATTGTTCTCCGGGATCAATCCTGCATGAAGAATGCGTGGGGGACTTATCCATTGGAGTCAAACATGATATCAGAAATACAAACAAAAAGTATGATATGAAATTTTCTTGCAAGGAGGATGCTCAGAAGAATTTACTAAAAGGGTTGACTGCAGATGAAAGTGTGATTGTTCATGATATGTCTTCATTGACCGTTGTTGTAGTAAACTACTGTGGATACACTGCAACAGTGAGGGTTGTGGGTAACATAAACACGAGGAAGCCTGAATTCCAAGATATTGAGATAGATGATCAGCCGGATGGAGGGGCAAATGCTCTCAATGTTAACAGTTTGAGGCTATTGCTTCACAAGTATGGAGCTGAGCCATCAGAAGGGAGATCATCACAATCAAATTTGGATGATTTAGAATCTTGTAGAAGTCTTGTTCGGAAGGTGGTTAAAGAAAGCTTGGAAAAGATAAATGAGGAGCCAGTTGTTTCAGAGAGGTCTATTCGGTGGGAACTTGGTTCTTGTTTGGTGCAGCATTTGCAAAAACAGGAAAATTCAACAGATACAAGTTCCAAAAAAAATGGTGGCAACGAAGTTGAACAACCTGTCAAAGGTCTTGGAAAGCAATTCAAATTTTTGAAGAGAAGGGAAAAGAAACCAAGTAATCTAGATACTGAAGATTTTAGAGAGCAAAATGACTCTAGACCTGGAAATTCTGGAATTGATAAAACCGGGCCAAACAATAGTGACTTAAGTAGCTCTGCTGAATTGGAGGGACTACTCTCGGAAGAAGCATTTTTGCGTCTGAAAGAATCTGGAACTGGTCTTCATCTTAAGACAGTGGATGAGCTTATAAATATGGCGCATAAGTACTATGACGAAATAGCCCTTCCAAAGCTGGTTACAGACTTTGGGTCACTTGAACTTTCTCCGGTTGATGGCCGTACGCTAACTGACTTCAAGCATTTAAGAGGACTGAGGATGCGGTCCCTGGGTGAAGTGGTTAAACTTGCAGAAAATCTTCCACATATACAATCCCTCTGTATTCATGAGATGGTTACTCGTGCTTTCAAGCATTTACTTAAAGCCGTTATTGCCTCAATTGACAATGTAGCAGACTTATCTCCAGCTATTGCCTCTACGCTGAATTTCTTACTTGGAAGCTGTCGATTGGAAGATACTGACCAAAAGTTGACTGAGGACAATCATCTCAGATTGCAGTGGTTACGGGTATATTTATCCAAAAGATTTGGATGGACATTAAATGATGAATTTCAGCATTTGAGGAAGTTATCAGTTCTTAGAGGGCTTTGTCATAAGGTTGGATTGGAATTGTTCCCTAGAGATTATGACATGGAAACCCCCAATCCCTTTGGGAAATATGACATTATCAGCTTGGTTCCTGTTTGCAAGTACGTAGGATGCTCCTCAATAGATGGACGCAATTTACTGGAATCATCCAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTATGGAACAAAGGCGTTGACAAAGATGATGGCAGTTTGTGGTCCCTATCATCGAACTACTGCAAGTGCTTACAGTCTTTTAGCTGTGGTTCTCTACCACACTGGAGATTTTAATCAGGCAACCATATATCAGCAAAAGGCCTTGGACATAAATGAGAGAGAGCTTGGGCTTGACCATCCAGACACAATGAAAAGCTATGGGGATCTTTCTGTCTTTTATTATCGTCTGCAACACATTGAGCTGGCTCTGAAGTATGTCAACCGTGCTCTCTTCCTCCTTCATTTTACATGCGGACTGTCCCATCCAAACACAGCTGCAACATATATAAATGTGGCTATGATGGAAGAGGGTATGGGAAATGTTCATGTGGCGCTCAGGTACTTACATGAAGCTCTTAAATGCAACAAAAGATTGTTGGGAGAAGATCATATACAGACTGCCGCAAGTTTCCATGCCATTGCCATAGCTCTTTCATTGATGGAAGCATATTCCCTGAGCGTACAACATGAGCAAACTACCCTCAAGATACTCCAAGAAAAACTTGGATCTGAAGATCTTCGTACACAGGATGCTGCTGCATGGCTTGACTATTTTGAATCAAAAGCAATTGAGCAGCAAGAAGCAGCTAAAAATGGGACTCCAAAGCCAGATGCATCAATTGCAAGTAAAGGTCACCTTAGTGTCTCAGATCTCCTAGATTTTATTAGTCCTGAGCAAGAGACAAAAGGAAATGATGCTCAGAGGAAACAGCGGCGTGCAAAGATACACCCAGTGACTGACAAAAACCATCAAGAACTCGACGATTCAACAGCTGATGAGGACATTCTCTTTGATGGTTCAAAAGATGCTTCAGGTACGGAAGAAGGCAAGGCTGAAGAAACAAATGGCATGTTTCGTTCGGAAGAGCTGAAAGAAAATAGTGAGTTCACTAGTTACGGGACAGTGACAAGTGAAGTTGTTGAGGAAACGTCATCTGATGAAGGGTGGCAAGAAGCCAATTCAAAAGGGCGCTCAGGAAATACATCTAACCGTAAATCTGGTCGGAGGAGGCCGCTTGTTGCAAAGCTGAGGATTAATAGTTCTGAGAATTACATTGTCAGAGAAAGCAGTTATAGGAATGACATTACTTCGCCACCAGTAAAAGGGACCCCAAAGATCACTTCAACGACCATGTCATCTCCACATAGACAGTCAAAAGCTAGTAACTTTACTATAAAACAGGACCCTGTCAATCATCCAACAAAAGCTTCAGTCTCCAAGCTTTCCTCTCCTCCAGCAGCTCTTAGTTCTTTGGCTTCAAAGAATATATCTTACAAAGAAGTGGCTCTGTCACCCCCAGGTACGGTTTTAAAGCCCTTGTTGGAGAAAGCTGAAGTAGACAGCGTAAAGGCTGAAAATGAGAAGTGTAACAGAGTTGAAAAAAGCAGCCAAAACTCCACAGTTGAAGCAGTCTCCGAGCATGATAAAAAAGAAAATACTTGTGAAACTGATGTTCAGCGAGAAGATTCTTCATCAGAACTTGAGGAGGTTTCCCTGTCTTCTGATCAGGCAAAACCTACGGAGAAAAATGGTAGTAAGCTTTCAGCTGCAGCGGAACCATTCAGCCCAGGAAATAATCTTCACCATTTAAATTCAGTCGCTGTCACAAGCATCTATGATGCAAATGCTAGTCAAGGCATGCTTGTGGAGCCTGTGCTTCCTCCTCCTGCTGCTAGGGTCCCCTGTGGGCCTAGATCACCTTTATATTATAGAACCAACTATACTTTTCGCATGAAACATGGTTATATAAAAAATCACACTCCCATTAGGGAAAGAAGCGGACTTGGGGCTCCAAGAATCATGAACCCCCATGCACCTGAGTTTGTTCCCAGACGGGCCTCACAAGAAGAAACTAGTGACGCCAATGCCACAGTTTTCAGCATGGCAGAAAACAACAAGCAAGATGAAAACTGCATCAAAGATGTGGAGGATAGCTTCCCAAGAAAGTGTATTTCTGGGTCTGAGAAGTCAGATCTAGCAAGGCAGATATTGCTTGGTTTGCTTGTGAAATCAGTTCAGCAAAACATCGATTCTGCGGATGAACCCAAAGTTAGTGTTGAAAAGTGCGAAAATTCTCCCGATGCAATAGCCAAAGATAGTGCTATTATAAAAATCCTAAATGGTAATGAAGAAAAAAACGAGATGGTTCCTAAATCCAATGGTAGTGAAGAGCAAGAGAACACGAAAAATAATGGAGATGGTGAAGGATTTATAGTTGTGACAAAGAGGAGAAAGAGCAGGCAAAAGTTCACTAATGGAGTAACGAGGTTGTATAACCAGCAGTCCATCTGTGCTTCAGTCCGTTGA 5115 0.4256 MPRGEKSTAILALATAPFXLLTNLEKKMAPRSGRGKSNKAKAEKKKKEEKASVPSLVDINVVTPYDSQIVLKGISTDKILDVKRLLAVNVETSHFTNYSLSHEVKGPRLNDRVEVVTLKPCILRMVEEDYTEEAQAIAHVRRLLDIVASTTRFTKPKRALTNTDSKAKKNCKAQHNNKSNSSPLTTPNGECRVESPTSESPISDDVGMVAIHPTPKLSDFYEFFSFSQLSPPILHLKRCELKNGDDRGKRDYFQLQIKICNGKLIEVVASEKGFYTVGKQSLQSHSLVDLLKQLSRGFANAYGSLMKAFVEHNKFGNLPYGFRANTWLVPPSVAECPSNFPSLPSEDENWGGNGGGQGRNGEHDLKPWARDFAILASLPCQTEEERVVRDRKAFLLHSQFVDTSIFKAVAAIRHVIDSKSNGDNKLNCSPGSILHEECVGDLSIGVKHDIRNTNKKYDMKFSCKEDAQKNLLKGLTADESVIVHDMSSLTVVVVNYCGYTATVRVVGNINTRKPEFQDIEIDDQPDGGANALNVNSLRLLLHKYGAEPSEGRSSQSNLDDLESCRSLVRKVVKESLEKINEEPVVSERSIRWELGSCLVQHLQKQENSTDTSSKKNGGNEVEQPVKGLGKQFKFLKRREKKPSNLDTEDFREQNDSRPGNSGIDKTGPNNSDLSSSAELEGLLSEEAFLRLKESGTGLHLKTVDELINMAHKYYDEIALPKLVTDFGSLELSPVDGRTLTDFKHLRGLRMRSLGEVVKLAENLPHIQSLCIHEMVTRAFKHLLKAVIASIDNVADLSPAIASTLNFLLGSCRLEDTDQKLTEDNHLRLQWLRVYLSKRFGWTLNDEFQHLRKLSVLRGLCHKVGLELFPRDYDMETPNPFGKYDIISLVPVCKYVGCSSIDGRNLLESSKIALDKGKLEDAVNYGTKALTKMMAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGEDHIQTAASFHAIAIALSLMEAYSLSVQHEQTTLKILQEKLGSEDLRTQDAAAWLDYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFISPEQETKGNDAQRKQRRAKIHPVTDKNHQELDDSTADEDILFDGSKDASGTEEGKAEETNGMFRSEELKENSEFTSYGTVTSEVVEETSSDEGWQEANSKGRSGNTSNRKSGRRRPLVAKLRINSSENYIVRESSYRNDITSPPVKGTPKITSTTMSSPHRQSKASNFTIKQDPVNHPTKASVSKLSSPPAALSSLASKNISYKEVALSPPGTVLKPLLEKAEVDSVKAENEKCNRVEKSSQNSTVEAVSEHDKKENTCETDVQREDSSSELEEVSLSSDQAKPTEKNGSKLSAAAEPFSPGNNLHHLNSVAVTSIYDANASQGMLVEPVLPPPAARVPCGPRSPLYYRTNYTFRMKHGYIKNHTPIRERSGLGAPRIMNPHAPEFVPRRASQEETSDANATVFSMAENNKQDENCIKDVEDSFPRKCISGSEKSDLARQILLGLLVKSVQQNIDSADEPKVSVEKCENSPDAIAKDSAIIKILNGNEEKNEMVPKSNGSEEQENTKNNGDGEGFIVVTKRRKSRQKFTNGVTRLYNQQSICASVR 1704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2073 1704 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 899 1149 - -
Bisa06g2073 1704 Gene3D Tetratricopeptide repeat domain 903 1149 IPR011990 GO:0005515
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 1406 1430 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 1298 1345 - -
Bisa06g2073 1704 ProSiteProfiles TPR repeat profile. 944 977 IPR019734 GO:0005515
Bisa06g2073 1704 SMART tpr_5 944 977 IPR019734 GO:0005515
Bisa06g2073 1704 SMART tpr_5 1028 1061 IPR019734 GO:0005515
Bisa06g2073 1704 SMART tpr_5 986 1019 IPR019734 GO:0005515
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 1157 1277 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 643 677 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 1656 1670 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 157 206 - -
Bisa06g2073 1704 SUPERFAMILY TPR-like 910 1058 IPR011990 GO:0005515
Bisa06g2073 1704 Pfam Translation initiation factor eIF3 subunit 135 731 873 IPR033646 -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 1432 1446 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 174 202 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 25 47 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 603 623 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 1647 1673 - -
Bisa06g2073 1704 ProSiteProfiles Clueless (Clu) domain profile. 346 613 IPR025697 -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 656 677 - -
Bisa06g2073 1704 Pfam Tetratricopeptide repeat 943 1013 - -
Bisa06g2073 1704 Pfam Tetratricopeptide repeat 1027 1101 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 1165 1229 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 603 619 - -
Bisa06g2073 1704 CDD CLU-central 733 874 IPR033646 -
Bisa06g2073 1704 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 36 1437 IPR027523 GO:0006996
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 1230 1264 - -
Bisa06g2073 1704 MobiDBLite consensus disorder prediction 1391 1458 - -
Bisa06g2073 1704 Pfam Mitochondrial function, CLU-N-term 76 147 IPR028275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2073 Bisa-ChrBisa06 64566313 64577539 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g2073 06 64566313 64577539 Bisa06g2073 06 64566313 64577539 ECH