Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2010 ATGAAGAAGCAATCCAACGCAGAACAACCGCCCATCACATTCCCATCCTCAAGATCGCCGTCGCATTTCTCATCGGAATGCTGGTTCGACGACGCGTGCATCCTCGACATGGACTACTTCGTCAAGACCCTCTCCGGCATCAAATTGAAAGGCGTGCGAGCCGACCTAATCGGCTCCGTCATCACGCACTACGCCTCCAAATGGCTCCCGGAGCTCTCCGACGGGAACGACGTCGTCGCGGAGAGAGGAACCCTCACTCAATTCGAAGAATCCCCCGAAAGCGTGACCGCTTCGTGGATGAAGAAGCGGTTCTTCGTGGAAACCCTAGTCGGCGTCCTGCCTCCAGAGAAAGACTCAATCCCCTGCAATTTCCTGCTCCGCCTCCTCAGAACCGCGAATATGGTCGGCGTCGAGGGCAATTACAGATCGGAGCTCGAGAAGCGGATTTCGTGGCAGCTAGACCAGGCGTCGCTCAAGGAGATCATGATTCCATCGTTCAGCCACACGTGCGAGACTCTGTTGGACGTGGAGCTCGTGACGAGGCTGGTGAAGAGGTTTGTGGGATTGGACAGCGACGGCGCGAAGAGCGGGGTTGCGCTGGTGAAGGTGGCGAAGCTGGTGGATTCGTATCTGCCGGAAGCGGCGGTGGATGCAAACCTGAGCTTGGTGGACTTCGCGGCGCTCGCAGGGGCTCTTCCTGCACATTCAAGAGCCACAGACGATGGATTGTACAGAGCCATTGATACGTATCTCAAAGCACATCCAAGGGTATCGAAGCAAGAAAGGAAAGGTCTCTGCAGGCTAATAGATTGCAGGAAGCTAACCCCAGAAGCCTCCCTTCACGCAGCTCAAAACGAACGCTTACCCGTGAGAGCAGTGATCCAGGTGCTGTTCTCGGAGCAAACCAAGCTGAACCGCCTCGTGGACTGGAGTGGGTCCTTCAACGGCACCAGAAGCCCCATCAATGGCGGTGGCCTGGACCTGCCGGCGAGGTCGCTGTCGAAGCGGGAGATGCACGCGCAGCACATGGAGATGAGGAAGCTGAGGGAGGACGTGTACAGGCTGCAGAGCCAGTGCACGGTGATGCAGCTGCAGATGGAGAGGATGATGGAGAAGAACAGCAAGAAGGGGTTCTTCAAGTGGAAGATTTTCGGCATGCCTGCCTTCAGCAAGAGCACCACCGTGACTTCTGTGGAGAAGATGGAGAAAGGAGGAGGCGTGGCTGAAGGGGAAGCTGGTGGGTTTGGAGGAAGACAAACCCCCGTCGACATGAAAACCAGGTTGGTCAAACCTCGCACTCCTCACAAGGGGAGGAAGTCCATGTCATGA 1329 0.5673 MKKQSNAEQPPITFPSSRSPSHFSSECWFDDACILDMDYFVKTLSGIKLKGVRADLIGSVITHYASKWLPELSDGNDVVAERGTLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEGNYRSELEKRISWQLDQASLKEIMIPSFSHTCETLLDVELVTRLVKRFVGLDSDGAKSGVALVKVAKLVDSYLPEAAVDANLSLVDFAALAGALPAHSRATDDGLYRAIDTYLKAHPRVSKQERKGLCRLIDCRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRLVDWSGSFNGTRSPINGGGLDLPARSLSKREMHAQHMEMRKLREDVYRLQSQCTVMQLQMERMMEKNSKKGFFKWKIFGMPAFSKSTTVTSVEKMEKGGGVAEGEAGGFGGRQTPVDMKTRLVKPRTPHKGRKSMS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2010 442 ProSiteProfiles NPH3 domain profile. 26 303 IPR027356 -
Bisa06g2010 442 MobiDBLite consensus disorder prediction 1 23 - -
Bisa06g2010 442 Pfam NPH3 family 27 279 IPR027356 -
Bisa06g2010 442 PANTHER OS12G0117600 PROTEIN 25 380 IPR043454 -
Bisa06g2010 442 MobiDBLite consensus disorder prediction 406 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2010 Bisa-ChrBisa06 63528365 63531657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2010 25 368 EF-hand Containing Proteins AT3G44820 33.952 1.06e-55 193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1863 10 50902611 50905716 Bisa06g2010 06 63528365 63531657 CCT
Bisa06g2010 06 63528365 63531657 Bisa06g2010 06 63528365 63531657 ECH