Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1933 ATGGATGCCAGTGAAGGAAATAGAAAATGCGACGCAAAATTCCCAGCCTTTCCCTTTAAACCCTACTCCATCCAGATCGATTTCATGAACGCTCTCTATCAGTCTCTCGACCAAGGTGGCGTTTCCATGCTGGAAAGTCCCACTGGTACTGGGAAGACTTTAAGTGTCATTTGTAGCGCCTTGCAGTGGGTGCTTGACCGGAAGCGACAAGAGGAATCAGTGGAAGCAGGACAAGAATGTGGTAAGAATCAGGGAATTCATGGCGGGCTTGGTTCCGATGACGAACCTGATTGGATGAGAGACTTTGTTTTGAACAAAGAAAGGGAGGGCCAACCTGAAAGAATAAATAAGAAGAAGAAGCATGGGTCTCTATTAGGTAAACCTGATAAGAAGAACAGGGAAATCAGTAAAGACTTTCAGGTTGTGGGTGAAGATTCTCCTCCTGAAATGGAGTTTGAGAATTCGCATAAGAAAATTGATGTATTGGATGTGGATGTTATTGATAAGGAATTTTTACTTGAAGAATATGAAAGTGAAGATGAAGAAGCAAAGGGTAAGATGACCTCAAAGAGGAAGGCTACTAGAAGTGTTCTTACTTCATCGAGTGATGAGGATGAGTCTGATGAGGAGGAGGAGGAGGCGGAGGAAAAGAAGTTGAAGATTTTTTTCTGTAGTCGAACGCATTCACAGCTTTCACAGTTCATAAAGGAATTACGGAAGACAGTCTTTGCCAATGAAATCAATGTTGTTTGCTTAGGCTCCAGAAAAAATCTTTGCATTAACGAAGAAGTACTAAAACTTGGAAACTCCACGCTCATAAATGAGCGTTGCTTGGAACTCCAGAAGAAAAAGAAAAAGGAGCCCACAAAAATTAAGAACTTAAGAGCATGTACAAGAGTACGGAGCACGAAGGCTTTGTCTGGTTGCCCAATGCTTAGAAAACGTGTACTACAAAGAGAATTCAAGAGTGAAGTATCTCAAAGAGGGGCCTTGGATATTGAAGATCTTGCTAACCTGGGAAGAAATTTGGGAACTTGTCCTTATTATGGCTCTAGAAGTATGGTTTTAAGAGCTGATCTTGTGGTCCTACCATATCAATCTCTTCTGTCAAAATCATCTCGCGAAGCGCTTGGTCTAAATTTGAAATCCAATATTGTTATAATAGATGAGGCTCATAATTTAGCTGATTCACTCATCAGCATTTATGACTCCAAAATTACTTTATCACAGCTGGAAAATGTGCATTCCCATGTGGAGAGATACTTTGAGAAATTCTGTAATCTTTTGGGCCCTGCCAATCGGAGATATATTCAAATTCTGATGGTCCTCACTCGAGCTTTTCTCAGAGTGCTACTCCATGATAAGGATGCATATCTCATAGATTCTTGGCAAGATACAGAAAAGACTTCTGAAGAAAGTAGGGCCTCTGAATTTACCATGTCCATCAATAATTTTATGTTTGAACTAAATATAGACAATATCAATGTGGTTAAGCTGGTGAAGTATTTGAAGGAAAGCAAAATCATGCACAAGGTTAGTAGTTATGGAGAAAGGGTAGCAAGCTTGGAGAAGATTTCAGTAATCAATAAATCTGGGGAATATTGTGAGGACGGAAGTACTCAGTCTGCTTTCCAGGCATTAGCTGACTTATTGCTATCACTAATAAACAATGATAGTGACGGAAGGATAATCATTTCCAGGTCTAGGCCAGCGAGCTCCAGGAAACTAGGAGGATATATTAAATATGTTATGCTCAGTGGAAAGAAGATTTTCTCTGAGATTGTAGACCAAGCACATGCTGTTCTATTAATAGGGGGAACATTGCAACCAATTGAAGAAACAAGAGAGCGGCTCTTTCCCTGGTTACCACCAAACCAGTTGCATTTCTTTTCATGTAGTCATATTGTCCCTCCACAGAGTATCATGCCAATTGCAGTTTCCCGTGGCCCTTCTGGCCGGTCGTTTGATTTTAGCTACAGCTCCAGGAGCTCACTAGATACAATACGGGAGCTTGGTCTTCTTCTCTGTAATTTGGTGACTGTGGTTCCCGAAGGAATTGTTGTTTTCTTCTCTTCTTTTGACTTTGAAGGAAAAGTCTATGAAGCCTGGCAATCTTCTGGCATCCTGGAGAGAATTACAAAGAGGAAGCGTGTATTTAGAGAGCCTAGAAATAATACAGATGTTGAATCTGTTCTTAAAGAATATAAAGAAACAATTTGTACATGTGTAAATTCAGAAGGAAACCCAGCATCTCAGAGCGGTGCAATACTCCTAGCTGTTGTTGGTGGAAAGATATCTGAAGGGATCAACCTAAGTGATGGGATGGGTCGATGTATAGTCATGGTTGGACTGCCATACCCTAGTCCATCAAACATTGAGTTGTTGGAGAGGATAAAGCACATTGAAAGTTTTCAAAATTCAAACGACATTGAAACTCCTAGGTTTTCTTCCAGTTATAATGTTTACAGTGGAGATATACAAGATGGTTTTGACATCTTAAAAAGTTGCAGTCACAGAGGAAAAGAATACTATGAGAATCTCTGTATGAAGGCAGTAAATCAATCAATAGGTAGAGCAATACGTCACATTAATGACTATGCAGCAATTTTGCTAGTTGACACGAGGTATGCATCTGATTCCTCAAAAAGGAGCTTTTCCCACCCAGTCAACAAGCTCCCACAGTGGATAAAAGATCGCTTTGTTTCATCTACCAAAAACTATGGTGAAGTCCATCGGTTGCTGAGTCAATTTTTCAAATTCAACAAAAGGGGTTGTCAATAG 2781 0.4024 MDASEGNRKCDAKFPAFPFKPYSIQIDFMNALYQSLDQGGVSMLESPTGTGKTLSVICSALQWVLDRKRQEESVEAGQECGKNQGIHGGLGSDDEPDWMRDFVLNKEREGQPERINKKKKHGSLLGKPDKKNREISKDFQVVGEDSPPEMEFENSHKKIDVLDVDVIDKEFLLEEYESEDEEAKGKMTSKRKATRSVLTSSSDEDESDEEEEEAEEKKLKIFFCSRTHSQLSQFIKELRKTVFANEINVVCLGSRKNLCINEEVLKLGNSTLINERCLELQKKKKKEPTKIKNLRACTRVRSTKALSGCPMLRKRVLQREFKSEVSQRGALDIEDLANLGRNLGTCPYYGSRSMVLRADLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLISIYDSKITLSQLENVHSHVERYFEKFCNLLGPANRRYIQILMVLTRAFLRVLLHDKDAYLIDSWQDTEKTSEESRASEFTMSINNFMFELNIDNINVVKLVKYLKESKIMHKVSSYGERVASLEKISVINKSGEYCEDGSTQSAFQALADLLLSLINNDSDGRIIISRSRPASSRKLGGYIKYVMLSGKKIFSEIVDQAHAVLLIGGTLQPIEETRERLFPWLPPNQLHFFSCSHIVPPQSIMPIAVSRGPSGRSFDFSYSSRSSLDTIRELGLLLCNLVTVVPEGIVVFFSSFDFEGKVYEAWQSSGILERITKRKRVFREPRNNTDVESVLKEYKETICTCVNSEGNPASQSGAILLAVVGGKISEGINLSDGMGRCIVMVGLPYPSPSNIELLERIKHIESFQNSNDIETPRFSSSYNVYSGDIQDGFDILKSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPVNKLPQWIKDRFVSSTKNYGEVHRLLSQFFKFNKRGCQ 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1933 926 Gene3D - 653 891 IPR027417 -
Bisa06g1933 926 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 11 440 IPR014013 GO:0005524
Bisa06g1933 926 SMART deadxpd 13 434 IPR006554 GO:0003678|GO:0016818
Bisa06g1933 926 Gene3D - 194 444 IPR027417 -
Bisa06g1933 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 399 IPR027417 -
Bisa06g1933 926 Gene3D - 18 74 IPR027417 -
Bisa06g1933 926 Pfam DEAD_2 223 411 IPR010614 GO:0003677|GO:0003678|GO:0005524
Bisa06g1933 926 NCBIfam DNA repair helicase (rad3) 181 907 IPR013020 GO:0003678
Bisa06g1933 926 MobiDBLite consensus disorder prediction 178 211 - -
Bisa06g1933 926 SMART Cxpdneu3 693 878 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Bisa06g1933 926 Pfam Helicase C-terminal domain 675 889 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Bisa06g1933 926 MobiDBLite consensus disorder prediction 106 153 - -
Bisa06g1933 926 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 14 919 IPR045028 -
Bisa06g1933 926 SMART ultradead3 17 439 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1933 Bisa-ChrBisa06 62193821 62198514 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1933 06 62193821 62198514 Bisa06g1933 06 62193821 62198514 ECH