LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa06g1817	ATGAAAAAGGGAAAAGGAAAAACCCATTGGGTTTGCTCGAATTGCGGGTATTCAGCGGGACAATGGTGGGGGGTTTGTCGCTCGTGTAATGTAGCTGGCACGATGAAAGAGTTTCATGAAGCGAAATCCAGTGACTCTGGTAGGGTTAATGGGTTTTCGGTTTCAGAGAATGCAGTGGGGTCGTGGCTCGCACAGCAGCCAGGTGAACTGCGTCCGTTGAGATTGACGGACGTGAACCGCGGACTCAATCATCAAGAGTGGAGAATTCCTTTCTTTGGTTCTTTTGGAGACGAAGTCTCTAGAGTGCTTGGTGGTGGTCTTGTACCAGGCTCCTTGATTTTAGTTGGTGGTGATCCTGGTGTGGGGAAGAGTACACTTCTGTTGCAGGACATACTGGAGAAAATTCAAAATCTCTCCCCTCGCGCTCTGATTGTTGATTCAATACAAACTGTGTATTTGAATGGAATAATGGGAAGTGCTGGAGGGATTATGCAAGTTAAGGAATGTACTTCAGCATTGCTGCGATATGCAAAGAAGACTAATACTCCAGTTTTGCTGATTGGACATGTAACTAAATCTGGAGATATAGCTGGACCTCGTGTCTTGGAACATATCGTTGATGTTGTTTTGTATATGGAAGGGGAGAAGTACTCTTCCCATCGTATGCTTCGAGTGGTGAAAAATCGCTTTGGATCCACTGATGAGCTTGGAGTTTTTGAGATGACACAATCAGGGCTTCAGACTGTTTCAAATGCCAGTGAAATATTTTTAAGTGAGCAACACTTAGATTCAGATATTTTAGCTGGGGTAGCTGTTGCTGTCATAATGGATGCTTCTCGAGCTTTCCTAATTGAAATTCAGGCACTTTGTGTTTCTGGTTCAACAGTTTCCAGGCATGTCAATGGCATCAGCCCTAGTAAAGCTGATATGATTATATCTGTTCTTAAAAAGCAAGCTGGACTCCATATCCAAGAAAATTCTGTGTTTTTGAACGTTGTTAGTGGACTGACACTGACTGAGACTGCTGGAGATCTTGCAATTGCAGCTGCAATTTGTAGCAGCTTTTTGGAATTCCCTCTTCCCAATGACATTGCATTCATTGGTGAAATTGGCCTTGGTGGTGAGCTTCGCACGGTTCCTAGAATGGATAAAAGGGTAAACGCTTTGGCTAAATTGGGTTACAGAACCTGTATTGTACCCAAGAAAGCTGAACATGTTTTAGGAACTGAAGGTTTTGAGAAGATGAAAATTGTAGGTTGCAGGAATCTGAAAGAGGTTATCAACACTGTTTTCACAAAATGA	1302	0.4309	MKKGKGKTHWVCSNCGYSAGQWWGVCRSCNVAGTMKEFHEAKSSDSGRVNGFSVSENAVGSWLAQQPGELRPLRLTDVNRGLNHQEWRIPFFGSFGDEVSRVLGGGLVPGSLILVGGDPGVGKSTLLLQDILEKIQNLSPRALIVDSIQTVYLNGIMGSAGGIMQVKECTSALLRYAKKTNTPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSHRMLRVVKNRFGSTDELGVFEMTQSGLQTVSNASEIFLSEQHLDSDILAGVAVAVIMDASRAFLIEIQALCVSGSTVSRHVNGISPSKADMIISVLKKQAGLHIQENSVFLNVVSGLTLTETAGDLAIAAAICSSFLEFPLPNDIAFIGEIGLGGELRTVPRMDKRVNALAKLGYRTCIVPKKAEHVLGTEGFEKMKIVGCRNLKEVINTVFTK	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa06g1817	433	Gene3D	-	267	433	IPR014721	-
	Bisa06g1817	433	Pfam	Rubredoxin metal binding domain	10	37	IPR041166	-
	Bisa06g1817	433	SUPERFAMILY	Ribosomal protein S5 domain 2-like	227	431	IPR020568	-
	Bisa06g1817	433	Pfam	Subunit ChlI of Mg-chelatase	312	402	-	-
	Bisa06g1817	433	Gene3D	-	131	254	IPR027417	-
	Bisa06g1817	433	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	94	262	IPR027417	-
	Bisa06g1817	433	Gene3D	-	97	130	IPR027417	-
	Bisa06g1817	433	PANTHER	DNA REPAIR PROTEIN RADA	129	432	-	-
	Bisa06g1817	433	FunFam	DNA repair protein radA isogeny	265	433	-	-
	Bisa06g1817	433	PRINTS	DNA repair protein radA signature	220	246	-	-
	Bisa06g1817	433	PRINTS	DNA repair protein radA signature	295	318	-	-
	Bisa06g1817	433	PRINTS	DNA repair protein radA signature	12	36	-	-
	Bisa06g1817	433	PRINTS	DNA repair protein radA signature	185	213	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa06g1817	Bisa-ChrBisa06	60089182	60097106	Tandem

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa06g1817	06	60089182	60097106	Bisa06g1817	06	60089182	60097106	ECH