Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1763 ATGGTTCAACTGGAAATCCAAAGAAGGAAAGCGATCTTCGATGCACTGATTAGATTGGCGGATTCCGTCGTGTTTTCGGGGGCCGTTGATTCGTTTTCCCGAGAAATGAACGGTGGCGATGCGGTCGTCGCAGCTCCGGCGGGTCCACCGCAGCCGCTGGAGTGGAAATTTTCTCAGGTTTTCGGCGAACGTGCGGCTGGCGAAGAAGTTCAGGAAGTGGACATAATTTCTGCCATTGAATTTGACAAGTCTGGTGACCATCTTGCTACTGGTGATCGTGGTGGTCGAGTTGTTCTCTTTGAGAGGACAGATACAAAAGATCATGGTGGATCAAGAAGGGATTTGGAGAGGATGGACTATTCTCTAAGTAGACATCCTGAGTTCCGTTATAAAACAGAGTTTCAGAGTCATGAACCTGAGTTTGACTATCTTAAGAGCTTGGAAATTGAAGAGAAAATCAACAAAATTAGATGGTGCCAAACAGCTAATGGTGCCCTATTTCTTCTATCTACAAATGATAAAACCATAAAATTTTGGAAGGTCCAAGAAAAGAAGGTCAAGAAAATTTCTGACATGAATGTTGACCCTTCAAAAGCTATGGGAAATGGCTCTATTGCTAGTTCAAGCAATTCAAGTAACCTTAGGCCATATCTTGCAAATGGAGTATTTCCAGATAAATCAAACAGTTATCTAAGCAATGACTTCACGTTTCCGCCTGGGGGCATCCCATCACTACGATTACCTTTGGTAGTAACCAGTCATGAGACCAGCCTGGTGGCTCGATGTCGTAGAGTATATGCTCATGCTCATGATTATCATATCAATTCTATTTCAAATAACAGTGATGGCGAAACGTTCATATCAGCTGATGATTTGAGAATAAATCTATGGAACTTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAACATGGAGGATCTGACCGAGGTAATAACATCAGCAGAGTTCCACCCTACACATTGCAACATGTTGGCATATAGCAGCTCAAAGGGTTCAATCCGTCTTGTTGACTTGCGGCAGTCTGCACTATGTGATTCTCATGCCAAACTATTTGAGGAACAGGAGGCCCCTGGGTCCAGATCATTTTTTACAGAGATTATTGCTTCTATCTCTGACATAAAATTTGGGAAGGATGGAAGATACTTACTTAGCCGCGATTACATGACACTAAAGTTATGGGACATTAATATGGATTCTGGCCCAGTTGCAACTTTCCAGGTTCACGAGTATTTAAGACCTAAGCTGTGTGATTTATATGAAAATGATTCAATTTTTGACAAGTTCGAGTGTTGTCTGAGTGGTGATGGATTGCGTGTAGCGACTGGTTCTTACAGCAATCTTTTCCGTGTGTTTGGTTGTACCCCGGGAAGTACCGAGGCTACAACTTTGGAAGCCAGCAAAAATCCAATGAGGCGACAAGTTCCAACTCCTTCAAGGCCTTCTAGATCTTTCGGGAGTAGTATAACACGGGTTGTAAGACGAGGAGGGGAAAGTGCCGGTGTTGATGGAAACGGGAATTCTTTTGATTTCACAACAAAGTTGCTGCACCTAGCATGGCACCCAACTGAAAATTCAATTGCTTGTGCTGCTGCAAATAGCCTGTACATGTACTATGCATAA 1656 0.4275 MVQLEIQRRKAIFDALIRLADSVVFSGAVDSFSREMNGGDAVVAAPAGPPQPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHGGSRRDLERMDYSLSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKISDMNVDPSKAMGNGSIASSSNSSNLRPYLANGVFPDKSNSYLSNDFTFPPGGIPSLRLPLVVTSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYLLSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCTPGSTEATTLEASKNPMRRQVPTPSRPSRSFGSSITRVVRRGGESAGVDGNGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 127 155 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 298 325 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 355 382 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 80 100 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 270 297 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 383 410 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 156 184 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 326 354 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 411 436 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 437 463 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 520 549 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 SMART WD40_4 410 464 IPR001680 GO:0005515
Bisa06g1763 551 SMART WD40_4 309 349 IPR001680 GO:0005515
Bisa06g1763 551 SMART WD40_4 368 406 IPR001680 GO:0005515
Bisa06g1763 551 SMART WD40_4 140 180 IPR001680 GO:0005515
Bisa06g1763 551 SMART WD40_4 259 298 IPR001680 GO:0005515
Bisa06g1763 551 SMART WD40_4 66 101 IPR001680 GO:0005515
Bisa06g1763 551 PIRSF PPA2_B55 46 551 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 SUPERFAMILY WD40 repeat-like 74 543 IPR036322 GO:0005515
Bisa06g1763 551 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 140 154 IPR018067 -
Bisa06g1763 551 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 244 547 - -
Bisa06g1763 551 Pfam WD domain, G-beta repeat 262 298 IPR001680 GO:0005515
Bisa06g1763 551 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 268 282 IPR018067 -
Bisa06g1763 551 Gene3D - 111 549 IPR015943 GO:0005515
Bisa06g1763 551 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 49 551 IPR000009 GO:0000159|GO:0019888
Bisa06g1763 551 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 71 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1763 Bisa-ChrBisa06 59104115 59112193 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1674 10 45759256 45766044 Bisa06g1763 06 59104115 59112193 CCT
Bisa06g1763 06 59104115 59112193 Bisa10g1674 10 45759256 45766044 ECH
Bisa06g1763 06 59104115 59112193 Bisa06g1763 06 59104115 59112193 ECH