Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa06g1494 | ATGGCAGACAAATCATGCATCAAGCGCCTTCAAAAGGAATATAGAGCTCTTTGTAAAGAGCCTGTTTCCCATGTTGTTGCTCGTCCATCGCCAAGTGATATTCTTGAGTGGCATTATGTCTTGGAAGGAAGTGAAGGAACACCTTTTGCAGGTGGATATTACTATGGGAAAATCAAGTTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACAACACCTAATGGACGCTTCATGACACAGAAAAAGATCTGCTTGTCCATGAGTGATTTTCATCCTGAAAGTTGGAATCCTATGTGGTCTGTATCAAGCATACTTACAGGGCTTCTTTCATTCATGATGGACAGCAGCCCAACTACCGGCAGTGTGAACACTACCACTGCCGAGAAGCAGCGTCTAGCGAAAGCTTCCATTGCTTTCAATTGTAAGAATGCAACATTCAGGAAAATGTTCCCGGAGTACGTCGAGAAGTATAACCAGCAGCAGCTTTCTGAGCAAGCTGCTTCCGAGCAAATTTCATCAGAGGCGGCATCTCATGACAAAAGTTCACGGCCTGTGTTGAGAAAGGTGCTAGATTCTACGGGGGATGACATGAAATCAGTAGATGAGTTGAAAGACATGGGAAAAAACAGAAAGCAATCTTTTCCCACATGGATGATGTTGTTACTCTTCTCCATTTTCGGGGTCGTAATGGCGCTTCCCCTGCTTCAACTGTGA | 723 | 0.4426 | MADKSCIKRLQKEYRALCKEPVSHVVARPSPSDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDSSPTTGSVNTTTAEKQRLAKASIAFNCKNATFRKMFPEYVEKYNQQQLSEQAASEQISSEAASHDKSSRPVLRKVLDSTGDDMKSVDELKDMGKNRKQSFPTWMMLLLFSIFGVVMALPLLQL | 240 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa06g1494 | 240 | PANTHER | UBIQUITIN-CONJUGATING ENZYME E2 | 7 | 159 | - | - | |
| Bisa06g1494 | 240 | SMART | ubc_7 | 8 | 162 | - | - | |
| Bisa06g1494 | 240 | MobiDBLite | consensus disorder prediction | 168 | 188 | - | - | |
| Bisa06g1494 | 240 | MobiDBLite | consensus disorder prediction | 168 | 182 | - | - | |
| Bisa06g1494 | 240 | ProSiteProfiles | Ubiquitin-conjugating (UBC) core domain profile. | 5 | 162 | IPR000608 | - | |
| Bisa06g1494 | 240 | Gene3D | Ubiquitin Conjugating Enzyme | 1 | 178 | IPR016135 | - | |
| Bisa06g1494 | 240 | Pfam | Ubiquitin-conjugating enzyme | 9 | 131 | IPR000608 | - | |
| Bisa06g1494 | 240 | FunFam | Ubiquitin-conjugating enzyme E2 34 | 1 | 177 | - | - | |
| Bisa06g1494 | 240 | CDD | UBCc | 7 | 157 | IPR000608 | - | |
| Bisa06g1494 | 240 | SUPERFAMILY | UBC-like | 5 | 158 | IPR016135 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa06g1494 | Bisa-ChrBisa06 | 51977375 | 51979993 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa06g1494 | 1 | 240 | Miscellaneous Gene Families | AT1G17280 | 76.667 | 3.79e-139 | 388 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bisa06g1494 | 06 | 51977375 | 51979993 | Bisa06g1494 | 06 | 51977375 | 51979993 | ECH |