Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1438 ATGTCTTTCTCTGCAACCAATTTCCCGCAACCCCTTTCTCTCAATTCTGCAGCTGCCAGATCCGATGATAAGCCTAATCCTATGGGTTTTGATCCCTTCAGGGATACCTCCTCGTTCATTGGATCCCGGCACAAGCTTCGTTTCAATGCCCTCACTAAGATTGCTAGCAACAATATCCACCGTCGAGCTCGAGCCACTGTTGTTGCTGTTTCCGATGTTGTCAACGAAAAGAAGCATAAATCAAGCCCCAATTTGCTAATTACGAAAGAGGAAGGCTTGGAGCTATATGAAGACATGGTATTAGGCAGGACATTTGAAGACATGTGTGCCCAGATGTACTATAGAGGCAAAATGTTTGGTTTTGTCCACTTGTATAATGGCCAAGAAGCTGTGTCAACTGGATTCATCAAGTTTCTGAAGAAAGAAGATTATGTAGTAAGCACCTATCGGGACCACGTTCATGCCCTGAGTAAGGGAGTCCCAGCTCGCGCTGTGATGAGTGAGCTCTTTGGAAAGGCTACTGGGTGCTGCCGAGGTCAAGGTGGTTCGATGCATATGTTCTCAAAAGAACACAATGTGCTTGGTGGGTTTGCATTCATTGGTGAAGGAATTCCAGTAGCCACAGGAGCAGCATTTTCCACTAAGTATACAAGGGAGGTATTGAAAGAGGCAAATGCTGATCAGGTCACAGTGGCATTTTTTGGAGATGGAACTTGTAACAATGGGCAATTCTTTGAATGCCTGAACATGGCAGCTTTGTGGAAGTTGCCAATTGTGTTTGTTGTGGAGAACAATTTGTGGGCTATAGGGATGTCGCATCTCAGGGCAACCTCAGATCCTCAGATATGGAAGAAAGGACCTGCATTTGGAATGCCTGGGGTTCATGTAGATGGAATGGATGTTTTGAAGGTTAGAGAGGTGGCAAAAGAGGCAATTGAAAGAGCTAGAAGAGGAGAGGGACCAACTTTAGTGGAATGTGAAACCTACAGATTTAGAGGACATTCATTGGCTGATCCTGATGAACTTCGTGACCCTGCTGAGAAGGCACACTATGCTGGTAGGGATCCCATCACTGCATTGAAGAAATACATGATTGAGAACAAGTTAGCGAGTGAAGAGGAGTTGAAGGCCATAGAGAAGAAGATTGATGAGGTGATTGAGGACTCTGTTGAGTTCGCTGAAGGAAGCCCTCAACCTCCTCGCAGCCAACTTCTGGAGAATGTGTTTGCTGATCCAAAAGGTTTTGGAATTGGACCAGATGGACGGTACAGATGTGAGGACCCAAAGTTCACTGAAGGCACTGCTCGCGTTTAG 1314 0.4581 MSFSATNFPQPLSLNSAAARSDDKPNPMGFDPFRDTSSFIGSRHKLRFNALTKIASNNIHRRARATVVAVSDVVNEKKHKSSPNLLITKEEGLELYEDMVLGRTFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKFLKKEDYVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFSTKYTREVLKEANADQVTVAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAHYAGRDPITALKKYMIENKLASEEELKAIEKKIDEVIEDSVEFAEGSPQPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTARV 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1438 437 Pfam Dehydrogenase E1 component 98 399 IPR001017 GO:0016624
Bisa06g1438 437 Gene3D - 43 418 - -
Bisa06g1438 437 CDD TPP_E1_PDC_ADC_BCADC 95 393 - -
Bisa06g1438 437 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 89 410 IPR017597 GO:0004739|GO:0006086|GO:0043231
Bisa06g1438 437 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 65 420 - -
Bisa06g1438 437 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 83 412 IPR029061 -
Bisa06g1438 437 Coils Coil 368 388 - -
Bisa06g1438 437 FunFam Pyruvate dehydrogenase E1 component subunit alpha 55 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1438 Bisa-ChrBisa06 50560693 50563464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1438 37 437 Acyl Lipid Metabolism Gene Families AT1G01090 83.042 0.0 694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1438 06 50560693 50563464 Bisa06g1438 06 50560693 50563464 ECH