Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1389 ATGCCGGGTCTAGTTGCCGTGAAAACCCAACCTCACGCGATACCGTTTGGCGTCTCCGATGCCGATTATTCCAATGGCGGCGAACACAGAACCCCATCGCCGCTCGTTAAGCGAACCCCGTTACAATCGCCTTCCCTATCACGAACATCCAAGAAGGTATCATCGGAGAAGCTGATTATAGACGATTGCTCCCCCGACAACCCGGATCTGGGTCCGTTTCTCTTGAGGCTTGCGCGCGACACGATAGCTTCGGGCGAGAACCCGAACAAGGCATTGGACTATGCGATCAGGGCGTCCAAATCCTTCGAGCGGAGTTCGGGTCCGGGTATGGAGCTTGCCATGTGTTTGCACGTTGTGGCGGCGATCTACAGCAGCTTGGGGCGGTTGGGCGAGGCAATTCACGAGCTGGAGCGGTCCATCGAGTTTCCTGATCCTGCTAAAGGATCGGATCACGCCATGGCAAAGTTTTCGGGTTACATGCAGTTAGGGGACACGTATTCGATGATCGGACAGTTGCACCGTTCCATCAAGTGTTACGAGTCGGGTTTGGAGATCCAACTGGAGGCTCTTGGAAAGTCCGATCCGAGGCTTGCAGAGACTTGCAGGTACTTAGCTGAAGCCCATGTTCAAGCTATGCAATTTGATGAGGCAGCGAACTTCTGCAAGAAAGCTCTTGAAATTCACAAGATACATAGCTCCCCAGCTTCCCTTCCAGAAGCAACTGACCGGCGTCTTATGGCCTTAATATGCGAGGCAAAGGGAGATTATGAATCAGCACTTGAGCACCTTGTTCTAGCTAGCGTGTCAATGATTGCTCATGGGCAAGAAAATGAGGTTGCAGCTATTGATGTTAGCATTGGCGATATTTACTCATCACTCTGTCGTTTCGATGAGGCTGTCTTTGCCTACCAGAAAGCACTCACAGTGTTCAAATCCACTAGGAGTGAAAATCACAGTTCTGTGGCATTAGTGAACATCCGCCTTGCCGACCTTTATTATAAAACAGGCAAATTACGGGAGTCAAAATCCTACTGCGAAAATGCCTTAAGAATATACACCAAACCTGTGCCTGGAACCACCCCCGAAGAGATTGCCTGTGGATTGACTGAAATCTCTGCCATCTATGAAGCTCTGAATGAGCCTGAGGAGGCACTGAAGTTCTTGCAGAAAGCAATGAAGTTATTGGAGGATAATCCTGGGCAGCATAGGACAGTTGCAGGTATAGAAGCACAAATGGCTGTGATGTTTTACATGCTTGGGAGATATGTGGAGGCTCGGAAATCTTTTGAGAATGCTATCACTAAACTGAGGTCTAGTGGGGAGAGGAAATCTGCATTTTTTGGAGTTTTATTGAACCAGATGGGCCTGGCTTGCGTGCAACTGTACAAAATAGGGGAGGCCGCCAAACTTTTTGAAGAAGCAAGAGAGATATTGGAGCAGGAGTGTGGAACATATCATTTGGACACTCTAGGAGTGTATAGCAATCTTGCAGCAACTTATGATGCCATGGGGAGGGTTGAAGATGCCATTGAGATATTGGAGCACATATTAAAGATGAGAGAAGAGAAGCTTGGAACAGCAAATCCTGATGTTGATGATGAAAGGAAAAGACTGTATGACCTTTTGAAAGAAGCAGGAAGAGTTCGGAATAAAAAGGGAAAATCACTCGAAAAGCTTATTGATTCCAGCTTTCTGAAGATGAAGAAGGAAGGAAGAAAGAGATGGGCTGCATTTGGTTTGAGAACTTAA 1749 0.4763 MPGLVAVKTQPHAIPFGVSDADYSNGGEHRTPSPLVKRTPLQSPSLSRTSKKVSSEKLIIDDCSPDNPDLGPFLLRLARDTIASGENPNKALDYAIRASKSFERSSGPGMELAMCLHVVAAIYSSLGRLGEAIHELERSIEFPDPAKGSDHAMAKFSGYMQLGDTYSMIGQLHRSIKCYESGLEIQLEALGKSDPRLAETCRYLAEAHVQAMQFDEAANFCKKALEIHKIHSSPASLPEATDRRLMALICEAKGDYESALEHLVLASVSMIAHGQENEVAAIDVSIGDIYSSLCRFDEAVFAYQKALTVFKSTRSENHSSVALVNIRLADLYYKTGKLRESKSYCENALRIYTKPVPGTTPEEIACGLTEISAIYEALNEPEEALKFLQKAMKLLEDNPGQHRTVAGIEAQMAVMFYMLGRYVEARKSFENAITKLRSSGERKSAFFGVLLNQMGLACVQLYKIGEAAKLFEEAREILEQECGTYHLDTLGVYSNLAATYDAMGRVEDAIEILEHILKMREEKLGTANPDVDDERKRLYDLLKEAGRVRNKKGKSLEKLIDSSFLKMKKEGRKRWAAFGLRT 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1389 582 SUPERFAMILY TPR-like 113 526 IPR011990 GO:0005515
Bisa06g1389 582 Gene3D Tetratricopeptide repeat domain 447 559 IPR011990 GO:0005515
Bisa06g1389 582 SMART tpr_5 280 313 IPR019734 GO:0005515
Bisa06g1389 582 SMART tpr_5 156 189 IPR019734 GO:0005515
Bisa06g1389 582 SMART tpr_5 406 439 IPR019734 GO:0005515
Bisa06g1389 582 SMART tpr_5 198 231 IPR019734 GO:0005515
Bisa06g1389 582 SMART tpr_5 322 355 IPR019734 GO:0005515
Bisa06g1389 582 SMART tpr_5 113 146 IPR019734 GO:0005515
Bisa06g1389 582 SMART tpr_5 365 398 IPR019734 GO:0005515
Bisa06g1389 582 SMART tpr_5 490 523 IPR019734 GO:0005515
Bisa06g1389 582 SMART tpr_5 448 481 IPR019734 GO:0005515
Bisa06g1389 582 Pfam MalT-like TPR region 120 263 IPR041617 -
Bisa06g1389 582 Gene3D Tetratricopeptide repeat domain 267 446 IPR011990 GO:0005515
Bisa06g1389 582 Gene3D Tetratricopeptide repeat domain 58 266 IPR011990 GO:0005515
Bisa06g1389 582 MobiDBLite consensus disorder prediction 16 48 - -
Bisa06g1389 582 Coils Coil 378 398 - -
Bisa06g1389 582 ProSiteProfiles TPR repeat profile. 490 523 IPR019734 GO:0005515
Bisa06g1389 582 ProSiteProfiles TPR repeat profile. 365 398 IPR019734 GO:0005515
Bisa06g1389 582 Pfam Tetratricopeptide repeat 450 522 - -
Bisa06g1389 582 Pfam Tetratricopeptide repeat 279 354 - -
Bisa06g1389 582 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 47 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1389 Bisa-ChrBisa06 49085520 49089482 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1389 06 49085520 49089482 Bisa06g1389 06 49085520 49089482 ECH