Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1098 ATGGATGAATTCGGAGGGAAGCGGTGCTTGAAATCGGGGAAAATGGGTTTGTTTTCTGGGCTTTTTCTGGGGATAGCAATCGGCATCGCTTTGATGGCTGGATGGCAGCGCATGATGAGATACCGAAGCGCCAAGCGAATTGCAAAGGCAGCGGATATTAAACTTCTTGGATCCCTTAGCAGAGATGATTTAAAGAAAATTTGTGGTGATAATTTTCCTGAATGGATATCTTTTCCCGTATATGAACAGGTGAAATGGCTAAACAAGCAGCTGAGCAAACTATGGCCATATGTAGCAGAAGCAGGATCAATGGTGATCAGAGAATCAGTTGAACCACTACTTGAAGAGTACAGACCTCCTGGAATTACTTCATTGAAGTTCAGCAAGCTGTCGCTTGGAAATGTTGCTCCAAAGATTGAAGGTATTCGTGTTCAGAGTCTTAAGAAAGGTCAAATCATAATGGACATTGATTTCCGATGGGGAGGTGATCCCAGTATTATTCTGGCTGTTGAAGCTGCACTAGTTGCATCAATCCCTATTCAGTTGAAGGATCTCCAAGTTTTCACCATTGTCCGTGTTATCTTCCAACTTGCTGAAGAGATACCCTGCATTTCTGCTGTTGTTGTTGCCTTACTTGCTGAGCCGAAGCCTAGGATTGAATACACTCTGAAGGCCGTTGGTGGAAGTTTGACAGCAATTCCTGGATTATCAGATATGATTGATGATACTGTGACCACAATTGTTACTGATATGCTACAATGGCCTCATAGGATCGTTGTTCCAATTGGTGGCATACCTGTTGATACTAGTGAACTGGAGCTTAAACCCCAGGGAAAGCTTACAGTGACAGTAGTGAAAGCCAATGATTTGAAGAATAAGGAAATGATTGGGAAGTCTGATCCTTATGTGGTTGTGTATATTCGACCCCTATTTAAGGTCAAAACCAAGGTTATTGACAACAACCTGAATCCTGTTTGGGATCAGACATTTGACCTGATCGCAGAAGACAAGGAAACCCAGTCACTCACTCTTGAGGTGCATGATAAAGATATTGGGCAAGACAAACGATTGGGAATAGTAAAATTACCACTTATTAATCTGGAAGCAGAAACTGAAAAGGAATTTGAATTGAGGCTTCTGTCATCGCTCGACACACTGAAGGTAAAAGACAAGAAGGACCGGGGAACATTGACAATTAAGGTCTTGTACCATCAATTTAGCAAGGAGGAGCAGTTGGCTGCTCTAGAAGCAGAGAAGAAGATACTAGAAGAAAGGAAGAAGCTGAAAGAGGCAGGAGTCATAGGAAGCACTATGGATGCAATAGATGGAGCAGCATCAATTGTTGGGTCTGGTGTTGGATTTGTCGGTAGCGGTGTTGTTGCTGGTGCTGGGCTCGTGGGAAGTGGCATTGGTGCTGGTGCTGGGCTCGTTGGCAGTGGCGTTGGTGCTGGAGTTGGGCTTGTTGGGAGCGGTCTTGGGGCCGTTGGAAGCGGACTGTCTAAGGCTGGAAAGTTCATGGGCAGGACTATTACTGGGAATAGTGGCCACTCCAGAAGGAGTGGTTCATCTACTCCAGTCAGTAATGGTCAGGAGAATGGTGGTGGCGCTAAGCCGCTGTGA 1620 0.45 MDEFGGKRCLKSGKMGLFSGLFLGIAIGIALMAGWQRMMRYRSAKRIAKAADIKLLGSLSRDDLKKICGDNFPEWISFPVYEQVKWLNKQLSKLWPYVAEAGSMVIRESVEPLLEEYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLKKGQIIMDIDFRWGGDPSIILAVEAALVASIPIQLKDLQVFTIVRVIFQLAEEIPCISAVVVALLAEPKPRIEYTLKAVGGSLTAIPGLSDMIDDTVTTIVTDMLQWPHRIVVPIGGIPVDTSELELKPQGKLTVTVVKANDLKNKEMIGKSDPYVVVYIRPLFKVKTKVIDNNLNPVWDQTFDLIAEDKETQSLTLEVHDKDIGQDKRLGIVKLPLINLEAETEKEFELRLLSSLDTLKVKDKKDRGTLTIKVLYHQFSKEEQLAALEAEKKILEERKKLKEAGVIGSTMDAIDGAASIVGSGVGFVGSGVVAGAGLVGSGIGAGAGLVGSGVGAGVGLVGSGLGAVGSGLSKAGKFMGRTITGNSGHSRRSGSSTPVSNGQENGGGAKPL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1098 539 FunFam synaptotagmin-4 isoform X1 273 431 - -
Bisa06g1098 539 Gene3D C2 domain 273 431 IPR035892 -
Bisa06g1098 539 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 278 404 IPR035892 -
Bisa06g1098 539 Coils Coil 405 432 - -
Bisa06g1098 539 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 82 262 IPR039010 -
Bisa06g1098 539 CDD C2 280 374 - -
Bisa06g1098 539 SMART C2_3c 279 376 IPR000008 -
Bisa06g1098 539 ProSiteProfiles C2 domain profile. 261 377 IPR000008 -
Bisa06g1098 539 CDD SMP_SYT 73 262 - -
Bisa06g1098 539 MobiDBLite consensus disorder prediction 510 531 - -
Bisa06g1098 539 Pfam C2 domain 278 374 IPR000008 -
Bisa06g1098 539 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 15 439 IPR045050 GO:0008289
Bisa06g1098 539 MobiDBLite consensus disorder prediction 507 539 - -
Bisa06g1098 539 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 80 263 IPR031468 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1098 Bisa-ChrBisa06 39230173 39265457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1098 280 370 Lipid Metabolism Gene Families AT4G00700 41.758 1.40e-10 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1098 06 39230173 39265457 Bisa06g1098 06 39230173 39265457 ECH