Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2829 ATGCAGCACTGTACCAGGGCCGTGTATACTGCTCCAATAAAAACCATCAGCAATCAGAAATATAGAGATTTCTGTGGGAAGTTTGATGTTGGGCTGCTTACTGGTGATGTAAGCTTGAGGCCAGAGGCTTCTTGTCTTATCATGACCACAGAAATTTTAAGGTCAATGCTCTACCGGGGTGCAGATATTATTCGGGATATTGAATGGGTAACGGACTCTTTCTGTGGCATCTTTCCAGCATTGGCTTATCTCTTTGTTATATTTGATGAAGTGCATTATGTCAATGATGTTGAAAGAGGTGTTGTTTGGGAAGAAGTAATTATCATGCTTCCAAGACACATCAATATCATCCTCCTTTCAGCCACGGTACCTAATACAGTTGAATTTGCTGATTGGATTGGGCGGACAAAACAAAAGGAAATCCGGGTTACAGGGACAACAAAAAGACCTGTCCCATTGGAGCACTGCCTGTTTTATTCTGGAGAACTTTACAAAATTTGTGAAAGTGAAACAATGCTGCCTCAGGGACTTAAAGCTGCTAAAGATGCATTCAAGAAAAAGAGTTCGACTGCTGGTGGTGGTGGTGGTGGTTCTGGACAATATACAGGGACTTCAGCAGGTCACGACAATAATCGAGTTCAAAAACGTGAAAATGCAGCTCGAGTGAAACATGGTAATAATATCTCCAAAACTGCCAGAAGCTATCAGAATAATGGAAATGGGCAGAACAACTGGGAACTCAGGAGAGCTGAAGCTTCTATATGGTTGATGCTTATTAACAAGCTCTCCAAAAAGTCGTTGTTGCCTGTTGTCATATTTTGTTTTTCAAAGAATCGTGTTGATAAATCAGCTGATAATATTACTGGAACTGATCTAACCAGTAGCTCAGAGAAGAGTGAGATCCGTGTTTTCTGTGATAAAGCATTTTCAAGACTGAAGGGATCTGACAGAAATTTACCACAGGTTGTTCGAGTCCAGAATCTTCTTCGTAGAGGGATTGGTGTGCATCATGCTGGCCTTCTTCCAATTGTTAAGGAAGTAGTTGAAATGCTATTTTGCCGTGGTGTTATCAAGGTCTTGTTTTCAACAGAGACATTTGCAATGGGGGTCAATGCACCGGCTAGAACAGTAGTCTTTGATACTTTAAGGAAGTTTGATGGCAAGGAATTTAGGCAGTTACTACCGGGAGAATATACTCAAATGGCTGGTCGTGCTGGAAGAAGAGGTCTTGATAAGATTGGTACTGTTATTCTGATGTGCCGTGATGAAATCCCAGAAGATAGGGATCTAAAGCATGTTATTGTTGGAAGTGCAACCCGTCTTGCATCTCAATTTCGACTTACCTATATTATGATCCTCCATCTTCTACGAGTTGAAGAATTGAAGGTGGAGGATATGCTTAAAAGAAGTTTTGCTGAATTCCATGCTCAGAAAAAGCTACCAGAAATGCAACAACTTTTGAAACGAATGCTTAATCAGCCTAAAAAATCTATTGAGTATGTCATTGCAGAATGTTGA 1518 0.4065 MQHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVTDSFCGIFPALAYLFVIFDEVHYVNDVERGVVWEEVIIMLPRHINIILLSATVPNTVEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKICESETMLPQGLKAAKDAFKKKSSTAGGGGGGSGQYTGTSAGHDNNRVQKRENAARVKHGNNISKTARSYQNNGNGQNNWELRRAEASIWLMLINKLSKKSLLPVVIFCFSKNRVDKSADNITGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVVRVQNLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVILMCRDEIPEDRDLKHVIVGSATRLASQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEMQQLLKRMLNQPKKSIEYVIAEC 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2829 505 MobiDBLite consensus disorder prediction 188 240 - -
Bisa05g2829 505 Pfam rRNA-processing arch domain 464 498 IPR025696 -
Bisa05g2829 505 Gene3D - 150 442 IPR027417 -
Bisa05g2829 505 Gene3D - 1 149 IPR027417 -
Bisa05g2829 505 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 3 491 - -
Bisa05g2829 505 MobiDBLite consensus disorder prediction 193 209 - -
Bisa05g2829 505 CDD SF2_C_Ski2 258 421 - -
Bisa05g2829 505 Gene3D - 443 495 - -
Bisa05g2829 505 SMART helicmild6 323 409 IPR001650 -
Bisa05g2829 505 FunFam DExH-box ATP-dependent RNA helicase DExH11 443 505 - -
Bisa05g2829 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 423 IPR027417 -
Bisa05g2829 505 MobiDBLite consensus disorder prediction 224 240 - -
Bisa05g2829 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 136 IPR027417 -
Bisa05g2829 505 FunFam DExH-box ATP-dependent RNA helicase DExH11 150 442 - -
Bisa05g2829 505 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 141 IPR014001 -
Bisa05g2829 505 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 291 456 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2829 Bisa-ChrBisa05 68211490 68224287 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g2829 05 68211490 68224287 Bisa05g2829 05 68211490 68224287 ECH