LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa05g2001	ATGTGGAACTCACGCGCTCTCTCTCATCTACTTATTCTTCTTCTTCTTCTTCTTCACTCGGTGGTAGCTCTGGTCTGTGCTCAGGGATCTACCAGAAACACTTGGAGTACACTAAGCGGAAGCCCACCATTAGTCATAGCACGTGGAGGATTTTCAGGGATATTTCCTGATTCCAGCCTTTATGCTTATAATTTGGCATCAATAACCAGTGTACCAGTCATCTCTTGGTGTGATGTGCAATTAACAAAAGATGCACGAGGGATTTGTCTTCCAGATATCAAGCTTGACAATGCTACTGACATTTCCAAAGTTTTTCAAAATAAATCCACCAATTACTTAGTTAATGGGGTACCAACACGTGGATATTTTTCAGTGGATTACACGCTGATGAATCTAAGCAATGTTCTCTTGGTTCAGGGAGTTTACTCTCGACCTAGCTACTTTGACGGCAATCTGTTTACAGTTCTTACTGTTGAGGATCTATTTAGTCAAGCCATCACCCCACCAGTCTTGTGGTTGAATATTCAGCATGATGCATTCTACACACAACACAATTTGAACATGAGAAGCTTCGTACTTTCTATTTCTAGAAGGGTTGTTATCAAGTATATCTCATCACCTGAGGTTGGTTTCCTGAGAGGTATAGCATCTCGCTTCAACCCCAATATAACTAAATTGGTCTTCAGATTTATGGACGAAGATGACTCAGATCCATCAACAAATCAGACTTATGGTTCACTCCTGAAAAATCTTAAATTTATCAAGACATTTGCTTCTGGAATTATGGTTCCCAAAAAGTACATATGGCCTGTAGATGCTAGTCAATATCTGCAACCAAATACCTCTTTGGTCGCTGTTGCTCACAAAGAGGGACTTGAAGTTTTTGCATCAGATTTTTTTAATGATATTCCACTTAGCTATAATTACAGTTATGATCCCCTTGCTGAGTACCTCCAATTCATTGACAACGGTGATTTCTCTGTTGATGGCATGCTGTCTGACTTCCCTATTACACCATCTGAAGCTGTTTACTGTTTTGCTCACCTCGGAGCAAATGCCACTAAAAGAGATAACACTTTGGTTATCTCAAAATATGGAGCAAGTGGAGACTATCCTGCCTGTACTGACAGGGCATATAACAAGGCCATATCAGATGGCGTAGATGTTCTTGATTGTCCCGTTCAAATGTCAAAGGATGGAATACCATTTTGTTTTAGCTCTATAGATCTTATAGAGAGTACAACAGTTGCTCAATCAAGGTTCAGTGAACTTGCCCAATTTATCCCAGAGGTCAAGTCTGGCAGTGGCATATTTTCATTCAGTTTGAAATGGGAAGAAATCAGTACCTTGACCTCCTCAATGTTGAATCCTTTTGTAAAATATAAATTGTTCCGGAATCCAACAAATAAGAATGCTGGGAAATTTATGACACTGTCAGAATTTTTGTCCTTCACAAAAAACCAGACTTCTCTTTCTGGTGTCATGATCACTGTTGAGAATGCAGCCTATCTTGCACAGAAGGAAGGATTAGATGTTACCAACGCTGTCCTTGATGCTTTGAGCAAAGCAGATTACAATAAGCGAGGGACACAAAAAGTTTTGATTCAGTCCACTAATAGCTCTGTACTAAAAGAATTCAAGGATAAATCCAGTTATGAGTGTGTCTATAAGATTGATGAGAAAGTTGGTGATGCCGTTAATGCGGCTGTTGAAGAGATCAAGGAATTTGCGGATTCTGTGGTTGTTGAGAAGTCATCTGTGTTTCCTCGTGACTCTGACTTCTTTCTGACTGGCTCTACAAACATGGTGACAAAGCTAAAATCTTTCAACCTTTCTGTCTATGTAGAAACTTTCAGCAATGAGTTTGTATCACAGGCCTGGGATTTCTTCTCAGATGCAACTGTGGAGATCAACACATTTATTCAGGCAGCAGAAATTAATGGTGTCATCACTGACTTCCCAAAGACGGCTAACAGATACAGAAGAAACCGATGTTTAATGTTGGGAAATGACACACCTCCTTACATGCAACCTGTTAAAGCCGGGGATCTTTTAAAACTTGTTACCAAAGACTACTTGCCACCAGCTCAGGCTCCTCTCCCATCCCTAACAGAATCTGAAGTGGCAGAGCCTCCTTTGCCCCCAGTTTCTAGAGAGAGAGCCTCTGCTCCTGGCCCTGCTACCGGAACAAGAGGCGGAGCATCTCCGCCCAGCAATGCACAGCCTAAGGTTACTGTCTGCTTCCTTCTATTTAGCGTGGCTGTATTTGTGTCCTTCCTTCTGCTGTTTTGA	2292	0.4123	MWNSRALSHLLILLLLLLHSVVALVCAQGSTRNTWSTLSGSPPLVIARGGFSGIFPDSSLYAYNLASITSVPVISWCDVQLTKDARGICLPDIKLDNATDISKVFQNKSTNYLVNGVPTRGYFSVDYTLMNLSNVLLVQGVYSRPSYFDGNLFTVLTVEDLFSQAITPPVLWLNIQHDAFYTQHNLNMRSFVLSISRRVVIKYISSPEVGFLRGIASRFNPNITKLVFRFMDEDDSDPSTNQTYGSLLKNLKFIKTFASGIMVPKKYIWPVDASQYLQPNTSLVAVAHKEGLEVFASDFFNDIPLSYNYSYDPLAEYLQFIDNGDFSVDGMLSDFPITPSEAVYCFAHLGANATKRDNTLVISKYGASGDYPACTDRAYNKAISDGVDVLDCPVQMSKDGIPFCFSSIDLIESTTVAQSRFSELAQFIPEVKSGSGIFSFSLKWEEISTLTSSMLNPFVKYKLFRNPTNKNAGKFMTLSEFLSFTKNQTSLSGVMITVENAAYLAQKEGLDVTNAVLDALSKADYNKRGTQKVLIQSTNSSVLKEFKDKSSYECVYKIDEKVGDAVNAAVEEIKEFADSVVVEKSSVFPRDSDFFLTGSTNMVTKLKSFNLSVYVETFSNEFVSQAWDFFSDATVEINTFIQAAEINGVITDFPKTANRYRRNRCLMLGNDTPPYMQPVKAGDLLKLVTKDYLPPAQAPLPSLTESEVAEPPLPPVSRERASAPGPATGTRGGASPPSNAQPKVTVCFLLFSVAVFVSFLLLF	763

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa05g2001	763	CDD	GDPD_SHV3_repeat_1	43	342	-	-
	Bisa05g2001	763	FunFam	Glycerophosphodiester phosphodiesterase GDPDL3	357	661	-	-
	Bisa05g2001	763	FunFam	Glycerophosphodiester phosphodiesterase GDPDL3	41	342	-	-
	Bisa05g2001	763	SUPERFAMILY	PLC-like phosphodiesterases	42	341	IPR017946	GO:0006629\|GO:0008081
	Bisa05g2001	763	Gene3D	Phosphatidylinositol (PI) phosphodiesterase	358	660	IPR017946	GO:0006629\|GO:0008081
	Bisa05g2001	763	Gene3D	Phosphatidylinositol (PI) phosphodiesterase	42	342	IPR017946	GO:0006629\|GO:0008081
	Bisa05g2001	763	MobiDBLite	consensus disorder prediction	698	738	-	-
	Bisa05g2001	763	Pfam	Glycerophosphoryl diester phosphodiesterase family	366	656	IPR030395	GO:0006629\|GO:0008081
	Bisa05g2001	763	ProSiteProfiles	GP-PDE domain profile.	43	343	IPR030395	GO:0006629\|GO:0008081
	Bisa05g2001	763	PANTHER	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	13	724	-	-
	Bisa05g2001	763	ProSiteProfiles	GP-PDE domain profile.	359	661	IPR030395	GO:0006629\|GO:0008081
	Bisa05g2001	763	SUPERFAMILY	PLC-like phosphodiesterases	358	661	IPR017946	GO:0006629\|GO:0008081
	Bisa05g2001	763	CDD	GDPD_SHV3_repeat_2	360	660	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa05g2001	Bisa-ChrBisa05	43062973	43072965	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa05g2001	8	763	Receptor kinase-like Gene Family	AT4G26690	54.222	0.0	825

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa05g2001	05	43062973	43072965	Bisa05g2001	05	43062973	43072965	ECH