LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa05g1847	ATGCAGAGATTCAAAGCTCTGCTACCGCAGAGTAGGTGCTCATTTCGCACCCTTGGCTTTCATCGCAGAAGCTTCTCTGCTCAACCTGACCATGTCGAGACCGACGACCCCCAGAACCAGATTTTAGTTGAAGGAAGAGCTATATCGAGAGCTGCTATTCTCAACAGACCGCATTCTCTAAATGCACTCACTACTTCGATGGTAGCTCGACTGAAGAGATTGTATACTTCCTGGGAAGATAACAATGATATTGGCTTTGTTTTAATGAAGGCTAATGGCAGGGCTTTTTGTGCTGGTGGAGATGTTGTAAGGCTTTATCACTTACTGAATGAAGGAAATGCTGAAGAAGCTAAACAGTTTTTCAGGACATTATATTCATTTGTATATCTTCAAGGGACATATTTCAAGCCAATTGTTGCTATTTTGGATGGTATAACAATGGGATGTGGAGCTGGAATTTCTCTTCCAGGGATGTTCCGTGTAGTAACTGATAAAACTCTTTTTGCTAACCCAGAGGCTCAGATGGGTTTTCACCCTGATGCAGGAGCTTCCTTTTACCTCTCCCATCTACCTGGCTACTTAGGAGAATACCTGGCTCTTACAGGGGACAAGCTTAATGGTGTAGAGATGATTGCTTGTGGCCTTGCAACTCACTATACACTAAATGCTAGGCTGGCTTGGCTTGAAGAACGCCTTGGTAAACTGGTCACAGATGAACCTTCTGTTGTAGAGACATCCCTTGCTCAGTATGGTGACCTTGTTTATCCTGACACTAGAAGCATTGTTCGCAAGATTGATAGAATTGATAGATGTTTCAGCCATGATACGGTCGAGGAAATTATTGATGCTTTGGAGAAGGAAGCAACAGAGTCTTATGATGAATGGTCTAAAACAACACTTCAAAAGATACGAGAAGCTTCACCATTAAGTTTGAAAGTTACTTTAAGATCTATTCGTGAAGGTAGATTTCAAACTCTTGATCAGTGTCTTGTACGTGAATACCGGACATCCCTTCGAGCAATTTCTAAGGAAGTCTCCTCTGATTTCCTTGAGGGTATTCGAGCAAGGCTGGTCGATAAAGATTTTGCACCAAAGTGGGACCCACCTAGTTTGAAAGAAGTATCAGAGGACATGATTGAATACTATATCTCTCCATTTAACGAAGCTGAGCCTGAATTGGAGCTGCCCACCTCCTTGCGGGAACCTTATATGTGA	1215	0.4272	MQRFKALLPQSRCSFRTLGFHRRSFSAQPDHVETDDPQNQILVEGRAISRAAILNRPHSLNALTTSMVARLKRLYTSWEDNNDIGFVLMKANGRAFCAGGDVVRLYHLLNEGNAEEAKQFFRTLYSFVYLQGTYFKPIVAILDGITMGCGAGISLPGMFRVVTDKTLFANPEAQMGFHPDAGASFYLSHLPGYLGEYLALTGDKLNGVEMIACGLATHYTLNARLAWLEERLGKLVTDEPSVVETSLAQYGDLVYPDTRSIVRKIDRIDRCFSHDTVEEIIDALEKEATESYDEWSKTTLQKIREASPLSLKVTLRSIREGRFQTLDQCLVREYRTSLRAISKEVSSDFLEGIRARLVDKDFAPKWDPPSLKEVSEDMIEYYISPFNEAEPELELPTSLREPYM	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa05g1847	404	PANTHER	3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED	37	398	IPR032259	GO:0003860
	Bisa05g1847	404	FunFam	Probable 3-hydroxyisobutyryl-CoA hydrolase 2	35	399	-	-
	Bisa05g1847	404	Gene3D	-	35	399	-	-
	Bisa05g1847	404	CDD	crotonase-like	54	218	-	-
	Bisa05g1847	404	Pfam	Enoyl-CoA hydratase/isomerase	51	382	IPR045004	-
	Bisa05g1847	404	SUPERFAMILY	ClpP/crotonase	53	369	IPR029045	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa05g1847	Bisa-ChrBisa05	34716275	34722621	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa05g1847	1	404	Acyl Lipid Metabolism Gene Families	AT4G31810	65.854	0.0	561

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa05g1847	05	34716275	34722621	Bisa05g1847	05	34716275	34722621	ECH