Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1846 ATGAAGTTTATGAAGCTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGCAAGTCTGTTATCAGGTACGTGTCACCAGATTTGGCCACTGATGTCATCATAAATGTTGGTGAAGTGAAGTTTCACCTTCACAAGTTTCCTCTACTGTCCAAGAGCAATAAGCTACAAAAGCTGGTATCAAAGGCCAATGAAGAAAATTCTGATGAAATATACCTGCCTGATTTCCCTGGAGGGCCAAAAGCCTTTGAAATATGTGCAAAATTCTGCTATGGAATAACCGTTACTCTTAACGCTTACAACGTTGTGGCTGCCCGTTGTGCAGCCGAGTACCTTGAGATGAACGAGGACATTGATAAAGCAAACTTAATTTTCAAAATTGAAGTGTTTCTGAACTCAGGCATCTTCAGAAGCTGGAAGGACTCCATAATTGTTCTCCAAACCACCAAGTCTCTTCTTCCATGGTCCGACAACTTGAAAATAGTTGGACGATGCATCGATTCCATAGCTTCTAAGACTTCAGTGAACCCATCACACATAACCTGGTCCTACACATATAACAGGAAACTAACGGGGGATGATGGAATCACAGAGCAGAAAATGGAGTGTGTTCCTAAGGATTGGTGGGTTGAAGATGTGTGTGAGCTAGACATCGATCTTTATAAAAGAGTGATGATTGCTGTGAAATCAAAGCGAAGAATGGACGGTGTTGTGATTGGAGAGGCTTTAAAAATCTATGCAATCAGATGGCTGCCTGATTCTGTTGATGCTTTGGTCTCTGAAGCTCATGCTCAGAGGAACAGATCTCTTGTAGAAACCATTGTCTGCTTATTGCCATGTGACTGTTCTTGTAGCTTCTTGTTTAAGCTATTGAAAGTGGTTATTTTAGTTGAAGCAGACGAGTCATCCAGAGAAGAACTCATGAAGAACATTGGCCTCAGATTGCATGAAGCTTCTGCGAAAGATTTACTCATCCCTGCAAGGTCTCCTCAGACGACCATATACGATGTTTCATTAGTACAGTGTCTTCTTAATCAGTACATGGCTTATGTACGTAAAAGCTATGATACGGAATTTGCTGAGGACAAAGATAAAGGAAGAAGCCTATTATGGAAAGTTGCCAAGTTGGTGGATGGTTATCTTGCAGAAATTGCACATGATTCAAATCTCAGCTTATCTAGTCTTGTTGATTTGTCACAGTCAATTCCAGAGTTCACTAGACTGAATCATGATGGTCTGTACCGAGCTATTGACATCTACTTGAAGGAGCACCCAGGTTTAACAAAACTGGAGAGGAAAAATCTGTGTGGTCTAATGGACGTCAAGAAGTTGACAGTGGAAGCATCGATGCACGCTGCACAGAACGATCGACTTCCTCTTCGAGTCATAGTGCAGGTTCTGTTCTACGAGCAGCTTAGAGCATCTTCCAACGTTCGATCTCTCAGCAACACTCGCTGTGATCCCCCAAACTCCATAACCAGTGGAGACGAGGATTCTGAGAAAACAGAAGGAGAGAATGTAAAACTGAGTAAGAAGAACAGCAAAAACAGTAAAAGTGGCACGCAACTGGTGCCGTCTCGATCGAGGAGGATCTTCGATAAGTTGTGGATTGTGGGGAGAGGACAGGGAGAGAACAGGAGCTCCGAGACTTCAGGGAGTTCTGATAGTCCAAACTCTGTTGTCCCTGTGGATAACAAGTCGTCTGGATCTTCATCCAGACAGAGGAGGCATTCTATCTCGTAG 1740 0.4322 MKFMKLGSKPDALQADGKSVIRYVSPDLATDVIINVGEVKFHLHKFPLLSKSNKLQKLVSKANEENSDEIYLPDFPGGPKAFEICAKFCYGITVTLNAYNVVAARCAAEYLEMNEDIDKANLIFKIEVFLNSGIFRSWKDSIIVLQTTKSLLPWSDNLKIVGRCIDSIASKTSVNPSHITWSYTYNRKLTGDDGITEQKMECVPKDWWVEDVCELDIDLYKRVMIAVKSKRRMDGVVIGEALKIYAIRWLPDSVDALVSEAHAQRNRSLVETIVCLLPCDCSCSFLFKLLKVVILVEADESSREELMKNIGLRLHEASAKDLLIPARSPQTTIYDVSLVQCLLNQYMAYVRKSYDTEFAEDKDKGRSLLWKVAKLVDGYLAEIAHDSNLSLSSLVDLSQSIPEFTRLNHDGLYRAIDIYLKEHPGLTKLERKNLCGLMDVKKLTVEASMHAAQNDRLPLRVIVQVLFYEQLRASSNVRSLSNTRCDPPNSITSGDEDSEKTEGENVKLSKKNSKNSKSGTQLVPSRSRRIFDKLWIVGRGQGENRSSETSGSSDSPNSVVPVDNKSSGSSSRQRRHSIS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1846 579 Gene3D Potassium Channel Kv1.1; Chain A 18 123 IPR011333 -
Bisa05g1846 579 MobiDBLite consensus disorder prediction 542 579 - -
Bisa05g1846 579 PANTHER OS12G0117600 PROTEIN 26 543 IPR043454 -
Bisa05g1846 579 SMART BTB_4 30 128 IPR000210 GO:0005515
Bisa05g1846 579 CDD BTB_POZ_NPY3-like 22 125 - -
Bisa05g1846 579 Pfam BTB/POZ domain 29 120 IPR000210 GO:0005515
Bisa05g1846 579 ProSiteProfiles NPH3 domain profile. 206 472 IPR027356 -
Bisa05g1846 579 MobiDBLite consensus disorder prediction 541 579 - -
Bisa05g1846 579 MobiDBLite consensus disorder prediction 493 511 - -
Bisa05g1846 579 MobiDBLite consensus disorder prediction 478 526 - -
Bisa05g1846 579 SUPERFAMILY POZ domain 23 117 IPR011333 -
Bisa05g1846 579 MobiDBLite consensus disorder prediction 478 492 - -
Bisa05g1846 579 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Bisa05g1846 579 Pfam NPH3 family 206 448 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1846 Bisa-ChrBisa05 34708340 34712610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1846 28 499 EF-hand Containing Proteins AT3G44820 33.205 3.26e-90 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1846 05 34708340 34712610 Bisa09g1125 09 16314943 16319496 CCT
Bisa05g1846 05 34708340 34712610 Bisa05g1846 05 34708340 34712610 ECH