Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa05g1667 | ATGGCAAACTCAGAAGAAGAAAATCAAGTTCCATTATCTCCAAACCCCAAAAATGGCCAGGAGATGCAGGAGTCCTCCAATGGCGACGATGAAGAAGACAACTACGACGAGGTCGAGGATGATGAAGATGTCAACGAACTGGAACTCCCTGCCCGAGTCCATGACGTGATAATCAAGGGGAATACGAAAACCAGGGATTGGGTGATTGAGGCCGAGGTGGAGGGAATAAAGAAAGCAATGACCATAGGAGAGCTGGTAGAAGCGGCGCAAATTGCCAATGCGAAGCTTCATAGCCTCCAGATTTTTGATTCGGTTAATATTAAGCTCGAGCCAGGGCCGTCAGAGCTGGCTGGTACTGCCAATGTCATCATTGAGGTCTCAGAGTCCGATAGCAAACTTTCTGGTGAAGTCGGTGTATATTCAAAACCCTCGGTTAGTTCTTGGACTCTTGAAGGTGCCCTAAAGTTTAAAAACTTGTTAGGTTATGGGGATCTATGGGATGGATCTCTGGCGTATGGTCCCAATCAAACATCAGAAGTGAGTGTTGGGGTGTTTGCGCCTCGATTGAAAGGATTATTGACCCCTGTTGTGGCACGAGTATTCATGCATTCCCAAGATTGGCAAGATTTTTCTTCGTACAAAGAGCGATTGTCCGGCATGTCTCTTGGCTTATTCTCAACAAAGCACCATGACTTAGTGTACAATATTGGATGGCGTACCATAACAGATCCATCACACAAGTCATCTAGGTCTATAAGGAGGCAGCTTGGGCATAGTTTACTGTCGTCTTTGAAGTATACATTTAAGATTGACAGGAGAAACTCACCAGTTAGGCCTACAAAAGGATATGCTTTTCTTTCTACAATTCAATTAGGTGGCCTTGCACCAGATCACCGGAGCTTGCGGTTTCTGCGTCAGGAGGTTGATATTCGATTTGCGGTTCCTTTGGGGTTTTGTCGTTCTGCACTGAACCTTGGGATCTCTGCTGGTGTCATTTTTCCATGGGGCCATGGGTTCTTGAACAAACCTTCTCCCCTGCCTGAAAGATTTTTCTTGGGCGGCGATTTCTCTCCAGTTTGCACCCTAGGAGGGCCAACAACATTATGGGGATTCAGGACAAGGGCATTAGGCCCTAGTGAACCACAAAGGCAAAGTAGTGGTGGAATTAGTGATGACAATGCTGATTCCTCTAAAAGGGACTTCATCGGAGGAGATCTTGCTGTTACTGCTTTTGCAGACCTCTCCTTTGATCTTCCAATTAGCTGGTTAAGAGAGCATGGAATCCATGGACATGTTTTTGCTGGTGCTGGGAATATTGGCAAGTTAACTGAGAACAAGTACAGGCAGTTCTCTCCTAAAAAATTTTTGGAATCATTTCGAACATCTGTGGGATGTGGAATTGTTATTCCTACAAAAATCTTCCGCCTAGAGGGTAACTACTACTACATACTCAGGCAGCACGAGCATGATCGTGGAAAGACTGGATTCAGGTTCAGCTTCTCTGCTCCTTCATAG | 1515 | 0.4561 | MANSEEENQVPLSPNPKNGQEMQESSNGDDEEDNYDEVEDDEDVNELELPARVHDVIIKGNTKTRDWVIEAEVEGIKKAMTIGELVEAAQIANAKLHSLQIFDSVNIKLEPGPSELAGTANVIIEVSESDSKLSGEVGVYSKPSVSSWTLEGALKFKNLLGYGDLWDGSLAYGPNQTSEVSVGVFAPRLKGLLTPVVARVFMHSQDWQDFSSYKERLSGMSLGLFSTKHHDLVYNIGWRTITDPSHKSSRSIRRQLGHSLLSSLKYTFKIDRRNSPVRPTKGYAFLSTIQLGGLAPDHRSLRFLRQEVDIRFAVPLGFCRSALNLGISAGVIFPWGHGFLNKPSPLPERFFLGGDFSPVCTLGGPTTLWGFRTRALGPSEPQRQSSGGISDDNADSSKRDFIGGDLAVTAFADLSFDLPISWLREHGIHGHVFAGAGNIGKLTENKYRQFSPKKFLESFRTSVGCGIVIPTKIFRLEGNYYYILRQHEHDRGKTGFRFSFSAPS | 504 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa05g1667 | 504 | Gene3D | membrane protein fhac | 50 | 129 | - | - | |
| Bisa05g1667 | 504 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Bisa05g1667 | 504 | MobiDBLite | consensus disorder prediction | 25 | 46 | - | - | |
| Bisa05g1667 | 504 | MobiDBLite | consensus disorder prediction | 377 | 396 | - | - | |
| Bisa05g1667 | 504 | FunFam | Outer membrane OMP85 family protein | 140 | 502 | - | - | |
| Bisa05g1667 | 504 | Gene3D | membrane protein fhac: a member of the omp85/tpsb transporter family | 134 | 502 | - | - | |
| Bisa05g1667 | 504 | FunFam | Outer membrane OMP85 family protein | 50 | 129 | - | - | |
| Bisa05g1667 | 504 | PANTHER | SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER | 18 | 501 | IPR039910 | - | |
| Bisa05g1667 | 504 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Bisa05g1667 | 504 | MobiDBLite | consensus disorder prediction | 378 | 392 | - | - | |
| Bisa05g1667 | 504 | Pfam | Surface antigen variable number repeat | 52 | 128 | IPR010827 | GO:0019867 | |
| Bisa05g1667 | 504 | Pfam | Omp85 superfamily domain | 158 | 501 | IPR000184 | GO:0019867 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa05g1667 | Bisa-ChrBisa05 | 31001938 | 31010570 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bisa05g1667 | 05 | 31001938 | 31010570 | Bisa05g1667 | 05 | 31001938 | 31010570 | CCT | |
| Bisa05g1667 | 05 | 31001938 | 31010570 | Bisa05g1667 | 05 | 31001938 | 31010570 | ECH |