Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1642 ATGAGCACCTACAACTACAAAATATTCAATTGCTTCAAACGTAAGTATACTATCATAGAGCCAGGCCCACCCAATGACGTGAAGTACGCCTTCTATAAGTTCAGCGCCGGCTCCGAAGCCATGTCGGCCGATCAGCTTTGGCGGTTCCTGGTGGAGCACCAGGGCGAATCAGACTGCACCGCTTCCGATTCCGTCCAGATATTTGAGAAGATTGTGCAATTGCGGAAGCAGAATCAGGAGACTGGCGACGCTGAGAAAACCACGAACTCCAATGAGGTTCAGGGTCTCTCTATCGATGAATTCTTCCATTTTCTACTCCTCGATGACTTCAATGCCCCCTTGAAGCCCCAGGTAAGCTTCTTGAAAATGTGGCAAGGAGAAAAGCATGTTCCTCTAGAATATCAGATTTTTCCGGTGCATCATGATATGAATGCTCCGCTATCACATTATTTCATATACACAGGACACAATTCTTATCTGACTGGGAATCAACTGAGCAGTGATTGTAGTGATGTGCCAGTCATAAAGGCTTTACAAGATGGTGTACGAGTAATTGAACTAGATTTATGGCCCAATTCAAATAAAAATGATATAATTGTAGTTCATGGGAGGACTCTCACCACTCCTGTTTCACTCGCTCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAGTCTCATTACCCCGTCATTATAACTTTAGAAGACCACCTCCCAAGTGATCTTCAAGCTAAAGTTGCACAGATGCTAACACAAATAATTGGAGAAACGCTTTATTATCCTGAGACAGATAGTATGGAAAAATTCCCCTCACCAGAATCATTGAAAGATCGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAAGATGAACCTTCGTCACCAAAAGAAGAATCGGACAATCCAAGAGCTGATGACAAGTGTGTGAAAATTGTATATTGGATGCTTAATGGGTCACGGGTGGGTGGATCTGATAGGTTCACTCAAAAGAATATTCTCAGGGTGTATCCAAAAGGAACACGTGTCTCCTCCTCGAATTTCATGCCACATATTGGGTGGAATTATGGAGCTCAGATGGTTGCATTCAACATGCAGGGGTATGGCAGACCACTAAGGTACATGCAAGGAATGTTTAGAGGAAATGGAGGGTGTGGTTACGTTAAAAAGCCCGATTGTCTATTGGGAAAAGGCCCACGTGGTGAAGTTTTTGATCCTGCCAGAGAGTTGCCAGCGAAGAAGACATTGAAGGTTAGAGTATTTATGGGGACGGGATGGAGCTCAGATTTCAGCCAAACACACTTCGATTCATTCTCCCCACCAGACTTTTACACGAAGGTCTGTATTGTTGGAGTAGATACTGATAAAGTGAAGAAGAAAACAAAGACAATTGACGATGATTGGTTTCCCGTTTGGGACGAAGAGTTTGAGTTCCCCATGAGTGTTCCAGAGTTGGCTTTGCTGAGGATAGAAGTTCGAGAGTACGACAGGCATGAAAAGGATGACTTTGGTGGTCAGACATGTTTTCCAGTTTCAGAGCTGAGGTCTGGTTTTCGGTCATTCCCTCTGTTTGATGAAAAGGGCAACAAACTCAAATCTGTGAGGCTTTTTATGCACTTCCAGTTTCATTGA 1638 0.431 MSTYNYKIFNCFKRKYTIIEPGPPNDVKYAFYKFSAGSEAMSADQLWRFLVEHQGESDCTASDSVQIFEKIVQLRKQNQETGDAEKTTNSNEVQGLSIDEFFHFLLLDDFNAPLKPQVSFLKMWQGEKHVPLEYQIFPVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPVIKALQDGVRVIELDLWPNSNKNDIIVVHGRTLTTPVSLAQCLKSIKEYAFVKSHYPVIITLEDHLPSDLQAKVAQMLTQIIGETLYYPETDSMEKFPSPESLKDRILISTKPPKEYLEDEPSSPKEESDNPRADDKCVKIVYWMLNGSRVGGSDRFTQKNILRVYPKGTRVSSSNFMPHIGWNYGAQMVAFNMQGYGRPLRYMQGMFRGNGGCGYVKKPDCLLGKGPRGEVFDPARELPAKKTLKVRVFMGTGWSSDFSQTHFDSFSPPDFYTKVCIVGVDTDKVKKKTKTIDDDWFPVWDEEFEFPMSVPELALLRIEVREYDRHEKDDFGGQTCFPVSELRSGFRSFPLFDEKGNKLKSVRLFMHFQFH 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1642 545 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 417 544 IPR035892 -
Bisa05g1642 545 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 329 396 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Bisa05g1642 545 Gene3D C2 domain 412 545 IPR035892 -
Bisa05g1642 545 Gene3D Phosphatidylinositol (PI) phosphodiesterase 138 410 IPR017946 GO:0006629|GO:0008081
Bisa05g1642 545 SMART plcy_3 287 397 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Bisa05g1642 545 SMART C2_3c 417 525 IPR000008 -
Bisa05g1642 545 ProSiteProfiles C2 domain profile. 401 527 IPR000008 -
Bisa05g1642 545 Pfam C2 domain 418 519 IPR000008 -
Bisa05g1642 545 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 329 544 IPR001192 GO:0035556
Bisa05g1642 545 FunFam Phosphoinositide phospholipase C 412 545 - -
Bisa05g1642 545 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 329 395 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Bisa05g1642 545 SMART plcx_3 141 285 IPR000909 -
Bisa05g1642 545 SUPERFAMILY PLC-like phosphodiesterases 141 398 IPR017946 GO:0006629|GO:0008081
Bisa05g1642 545 Gene3D - 23 115 - -
Bisa05g1642 545 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 141 285 - -
Bisa05g1642 545 Pfam Phosphatidylinositol-specific phospholipase C, X domain 143 285 IPR000909 -
Bisa05g1642 545 PRINTS Phospholipase C signature 146 164 IPR001192 GO:0035556
Bisa05g1642 545 PRINTS Phospholipase C signature 172 192 IPR001192 GO:0035556
Bisa05g1642 545 PRINTS Phospholipase C signature 511 521 IPR001192 GO:0035556
Bisa05g1642 545 PRINTS Phospholipase C signature 356 374 IPR001192 GO:0035556
Bisa05g1642 545 PRINTS Phospholipase C signature 269 286 IPR001192 GO:0035556
Bisa05g1642 545 PRINTS Phospholipase C signature 335 356 IPR001192 GO:0035556
Bisa05g1642 545 CDD C2_PLC_like 415 544 - -
Bisa05g1642 545 SUPERFAMILY EF-hand 9 113 IPR011992 -
Bisa05g1642 545 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1642 Bisa-ChrBisa05 30478842 30483039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1642 5 544 Acyl Lipid Metabolism Gene Families AT5G58690 47.841 0.0 536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1642 05 30478842 30483039 Bisa05g1642 05 30478842 30483039 CCT
Bisa05g1642 05 30478842 30483039 Bisa05g1642 05 30478842 30483039 ECH