Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1641 ATGTCACTCACTCCAGACGATTCTGTTTTAAAGAAACAGAGTGAGAATCAGGAAGAAGAAGAAAGGATTGATCAAAACATGAAGACCTATAACAAGTACAAGCGGCTCTTATTCTTCACCAGGAAGTACAAGATGACCGATCTTGTTCCGCCTCTAGACCTCAAGGAAGCCTTCTCCAAGTTCGCCGACGGTGGCTCCCGCATCGCCGCCGACCAACTCCGGCGGCTCCTGGCGGAGCACCAGGGCCACGTGGACTGCACGCTATCGGAATCGGAGCAAATCGTCGAGAAGGTTCTTAAGATGCGGAGGGGGAATCACGAAACTACTGACGCTGATCAGAACGAAGAACAACACGGACTCACCCTCGAAGACCTCTTCTATTTTCTGCTTTTCGATGATTACAACAGTCCTCTGAAAGCTGAGGTTCATCATGATATGGATGCTCCGTTATCACACTATTTCATATATACAGGGCATAATTCGTATCTGACAGGGAATCAATTGAGCAGTGATTGCAGTGATGAACCGATCATAAAGGCTCTGCAACGAGGCGTGAGAGCTATTGAACTAGATTTATGGCCGACTTCTAATAAAGATAATATTAAAGTAGTTCATGGATGGACTTTTACCAATCCTGTCCCTCTCAACAGATGTCTGGAGGCCATAAAGAAGCATGCTTTTGTTGCATCTCAGTACCCAGTGATTATAACTATAGAAGACCACCTCACAAGAGATCTTCGAGATAAATTTGCAGTGATGGCAACTCAGACATTCGGAGAATTGCTTTATTATCCTCAAACTGAAGGTTTGACAGAATTCCCATCACCAGAGTCATTGAAAAATAAAATAATTATATCCACCAAAACCCCAAAAGAACATCTCAAATCCAAAAGCGGTAAGGATAGAGGTAATACTAACAGCCCTGTGCTGGAAGGAAGTGAATCGTCTGAAGAAGAATCATGGGGTCAGGAGTCGTCAGACTCTATGGCAGAACTAGAGACTGTGGACAAGAATGGAAGTGATAAGGATGAGGGAGACATAAACGCTGGCGATCACAAGTCAGACAACCAGTGCTCACCTGATTACAAACGCCTAATTACAATCCATGCCAGGAAACTCAAGGGTAGCTTAAAGGAAAAATTGCAGATTGATGATGGAGTTAGACGTCTAAGTTGGAGTGAGCAGACACTTGAAAAGGCTTCTGAATCTCATGGAACTGATATTGTTAGGTTCACACAGAAAAATATCCTCAGGGTATACCCAAGAGGAACGCGTGTCCAATCCACAAATTTCAAGCCACATCTTGGGTGGCTGTATGGAGCTCAAATGGTTGCATTCAATATGCAGAGGAATGGCAAGCAACTCTGGCTGATGCAGGGGATGTTCAGGGCAAACGGAGGGTGTGGTTATGTTAAAAAACCGGAAATAATAATGCAAAAACTTCCAAGTGGTGAAGTATTTGATCCTAAAGGAACATTATCAGTGAAAAAGACATTAAAAGTAAAAGTATACATGGGACATGGCTGGAGCTTAGATTTCAGTCCAACACACTTTGATAAGTTCTCTCCACCAGACTTCTACACAAAGGTGCGTATAGTTGGAGTGCCAGCTGATTGTGCAAAGAAGAAAACAAGGGTAAAAATGGACAATTGGTTTCCTGTTTGGGATGAAGAATTTGAATTCCCTCTGACTGTTCCGGAGCTTGCATTGCTTCGGATAATAGTGAGGGAGAAAGATCAGGGAAAAGACGACTTTGGTGGACAGACATGTATGCCAGTCTCAGAGCTCAGAGTCGGCTTTCGGTCAGTTCCTCTGTATAACAGGAGGGGAGAGAAATATAAATCTGTAAAGCTTTTAATGCAGTTTCAGTTTGAGTGA 1878 0.435 MSLTPDDSVLKKQSENQEEEERIDQNMKTYNKYKRLLFFTRKYKMTDLVPPLDLKEAFSKFADGGSRIAADQLRRLLAEHQGHVDCTLSESEQIVEKVLKMRRGNHETTDADQNEEQHGLTLEDLFYFLLFDDYNSPLKAEVHHDMDAPLSHYFIYTGHNSYLTGNQLSSDCSDEPIIKALQRGVRAIELDLWPTSNKDNIKVVHGWTFTNPVPLNRCLEAIKKHAFVASQYPVIITIEDHLTRDLRDKFAVMATQTFGELLYYPQTEGLTEFPSPESLKNKIIISTKTPKEHLKSKSGKDRGNTNSPVLEGSESSEEESWGQESSDSMAELETVDKNGSDKDEGDINAGDHKSDNQCSPDYKRLITIHARKLKGSLKEKLQIDDGVRRLSWSEQTLEKASESHGTDIVRFTQKNILRVYPRGTRVQSTNFKPHLGWLYGAQMVAFNMQRNGKQLWLMQGMFRANGGCGYVKKPEIIMQKLPSGEVFDPKGTLSVKKTLKVKVYMGHGWSLDFSPTHFDKFSPPDFYTKVRIVGVPADCAKKKTRVKMDNWFPVWDEEFEFPLTVPELALLRIIVREKDQGKDDFGGQTCMPVSELRVGFRSVPLYNRRGEKYKSVKLLMQFQFE 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1641 625 SMART plcx_3 144 288 IPR000909 -
Bisa05g1641 625 MobiDBLite consensus disorder prediction 301 316 - -
Bisa05g1641 625 SUPERFAMILY EF-hand 44 146 IPR011992 -
Bisa05g1641 625 MobiDBLite consensus disorder prediction 286 300 - -
Bisa05g1641 625 Gene3D C2 domain 492 625 IPR035892 -
Bisa05g1641 625 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 389 475 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Bisa05g1641 625 Coils Coil 16 36 - -
Bisa05g1641 625 MobiDBLite consensus disorder prediction 281 359 - -
Bisa05g1641 625 MobiDBLite consensus disorder prediction 1 24 - -
Bisa05g1641 625 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 144 288 - -
Bisa05g1641 625 Gene3D - 46 140 - -
Bisa05g1641 625 Gene3D Phosphatidylinositol (PI) phosphodiesterase 141 489 IPR017946 GO:0006629|GO:0008081
Bisa05g1641 625 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 14 624 IPR001192 GO:0035556
Bisa05g1641 625 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 498 624 IPR035892 -
Bisa05g1641 625 SMART plcy_3 362 478 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Bisa05g1641 625 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 391 477 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Bisa05g1641 625 SUPERFAMILY PLC-like phosphodiesterases 144 479 IPR017946 GO:0006629|GO:0008081
Bisa05g1641 625 CDD C2_PLC_like 496 625 - -
Bisa05g1641 625 FunFam Phosphoinositide phospholipase C 493 625 - -
Bisa05g1641 625 PRINTS Phospholipase C signature 591 601 IPR001192 GO:0035556
Bisa05g1641 625 PRINTS Phospholipase C signature 416 437 IPR001192 GO:0035556
Bisa05g1641 625 PRINTS Phospholipase C signature 149 167 IPR001192 GO:0035556
Bisa05g1641 625 PRINTS Phospholipase C signature 272 289 IPR001192 GO:0035556
Bisa05g1641 625 PRINTS Phospholipase C signature 175 195 IPR001192 GO:0035556
Bisa05g1641 625 PRINTS Phospholipase C signature 437 455 IPR001192 GO:0035556
Bisa05g1641 625 ProSiteProfiles C2 domain profile. 482 607 IPR000008 -
Bisa05g1641 625 Pfam C2 domain 498 596 IPR000008 -
Bisa05g1641 625 Pfam Phosphatidylinositol-specific phospholipase C, X domain 146 288 IPR000909 -
Bisa05g1641 625 MobiDBLite consensus disorder prediction 330 359 - -
Bisa05g1641 625 SMART C2_3c 498 605 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1641 Bisa-ChrBisa05 30423390 30426526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1641 17 625 Acyl Lipid Metabolism Gene Families AT2G40116 54.430 0.0 672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1641 05 30423390 30426526 Bisa05g1641 05 30423390 30426526 CCT
Bisa05g1641 05 30423390 30426526 Bisa05g1641 05 30423390 30426526 ECH