Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1602 ATGTGTTCACTTCACCCTCAAGCTCCATCCTCCCTCCTCCTTCCATTGGTCGGGTCGGCGATTCCTTCCCGATCCTATTGGCTTTTCTTGACGTTTGAAGGTGTTTTGCTTCATTGGTTTTTCACTCTTGCGGACTTTGAAATGGCCATGGAGGATCGAAAAGAGAGCAGAATGAGCGCCGGATTGACTGATGTGGTTCTAGACTGTGTTATGCCTTATATTCACGACCCCAAAGACCGGGATGCGATTTCTCAAGTTTGCCGGCGGTGGTACGAGCTTGACTCCTTGACGCGAAAGCACGTCACGATTGCTCTCTGTTACACGACGACTCCGGACCGTCTCCGCCGGAGATTTCCGCACCTGGAGTCGTTGAAGCTGAAAGGGAAACCGAGGGCGGCGATGTTTAATTTAATTCCCGAGGATTGGGGAGGGTATGTAGCGCCTTGGGTGAAAGAGATTGGAGAGTATTTTGATTGCTTAAAGTCGCTCCATTTTCGGCGCATGATTGTGAGAGATTCCGATCTTGAGTTTCTTGCACGGTCTCGGGGACACGTTCTTCAATCACTTAAACTCGACAAGTGTTCTGGTTTTTCCACGGATGGCCTTTTCCATATTGGCCGGTCTTGCAGGAATTTAAGAGTCCTGTTTTTGGAGGAGAACCAAATTATTGAAAATGGTGGCGAATGGCTACATGAGCTTGCTTTGAATAATACAGTTCTTGAAGCTCTAAATTTTTATACAACAGATCTTGCCAATATCAGAATTGAGGACCTTGAACTTATAGCAAAAAACTGCCGCAACTTAGTTTCTGTGAAAATTACTGATATTGAAATATTGGATCTTGTGAACTTCTTTTGTTCTGCATCTGCACTAGAAGAATTTTGTGGAGGTTCTTACAATGAGCAGCCGGATAGATACACTGCTGTATCGTTTCCTGCAAAGTTATGTCGATTGGGTTTAACATATATTGCAAAGAATGAACTGCCAATAGTGTTCCCTTTCGCAGCCCTCCTCAAAAAATTGGATCTTCTATATTCCATGTTGGATACAGAGGATCATTGTACATTAATCCAAAAGTGCCCCAATTTGGAAGTCCTTGAGTCAAGGAATGTAATTGGAGACAGAGGATTAGAAGTTCTTGCTCGGAGCTGCAAGAGGCTTAAGAGGCTTAGGATTGAGCGTGGAGATGATGAGCAAGGAATGGAGGATGAAGAAGGTGTTGTTTCTCAGAGAGGGTTGATTGCTTTGTCACAGGGCTGTCCAGAACTTGAATACTTGGCTGTTTATGTATCTGACATTACAAATGCATCTCTGGAACATATAGGCACTCACTTGAAAAACCTCACTGATTTCCGCCTTGTCTTGCTAGACCGTGAGGCTACCATAACTGATTTACCACTTGACAATGGGGTGAGGGCTCTATTAAGGGGGTGTGATAAGCTCAGAAGATTTGCTCTGTATCTCCGTTCTGGGGGCTTGACTGATGTTGGCCTTGCATACGTTGGGCAATACAGCCAAAATGTAAGATGGATGCTTCTGGGATATGTAGGGGAATCTGATGCAGGGCTTCTGCAGTTTTCTAAGGGCTGCCCTAGCCTTCAGAAGCTTGAAATGAGGGGATGTTCCTTCAGTGAGTATGCTCTAGCCGTTGCTGCCACACAGCTGACTTCTCTGAGGTACATATGGGTGCAAGGATATAGAGCATCTGCATCTGGGCGCGATCTTTTGGCAATGGCTAGGCCCTTCTGGAATATTGAGTTGATTCCTTCTAGACGAGTTCTTGTTACATATCCTCGTGGAGAGTCTGTACTGGTTGAGCATCCAGCACATATTCTTGCATATTACTCTCTTGCAGGACAGAGATCAGATTGTCCAGATACTGTCATTCCCTTGGATCCAGTAGCATCTATTGTAGCTTAG 1920 0.4521 MCSLHPQAPSSLLLPLVGSAIPSRSYWLFLTFEGVLLHWFFTLADFEMAMEDRKESRMSAGLTDVVLDCVMPYIHDPKDRDAISQVCRRWYELDSLTRKHVTIALCYTTTPDRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGYVAPWVKEIGEYFDCLKSLHFRRMIVRDSDLEFLARSRGHVLQSLKLDKCSGFSTDGLFHIGRSCRNLRVLFLEENQIIENGGEWLHELALNNTVLEALNFYTTDLANIRIEDLELIAKNCRNLVSVKITDIEILDLVNFFCSASALEEFCGGSYNEQPDRYTAVSFPAKLCRLGLTYIAKNELPIVFPFAALLKKLDLLYSMLDTEDHCTLIQKCPNLEVLESRNVIGDRGLEVLARSCKRLKRLRIERGDDEQGMEDEEGVVSQRGLIALSQGCPELEYLAVYVSDITNASLEHIGTHLKNLTDFRLVLLDREATITDLPLDNGVRALLRGCDKLRRFALYLRSGGLTDVGLAYVGQYSQNVRWMLLGYVGESDAGLLQFSKGCPSLQKLEMRGCSFSEYALAVAATQLTSLRYIWVQGYRASASGRDLLAMARPFWNIELIPSRRVLVTYPRGESVLVEHPAHILAYYSLAGQRSDCPDTVIPLDPVASIVA 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1602 639 CDD F-box_AtTIR1-like 62 98 - -
Bisa05g1602 639 Pfam F-box 61 100 IPR041567 -
Bisa05g1602 639 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 66 270 - -
Bisa05g1602 639 SUPERFAMILY RNI-like 413 567 - -
Bisa05g1602 639 SUPERFAMILY RNI-like 137 451 - -
Bisa05g1602 639 FunFam Coronatine-insensitive protein 1 99 634 - -
Bisa05g1602 639 Gene3D Ribonuclease Inhibitor 99 634 IPR032675 -
Bisa05g1602 639 Pfam Transport inhibitor response 1 protein domain 119 165 IPR041101 -
Bisa05g1602 639 Gene3D - 48 98 - -
Bisa05g1602 639 SMART LRR_CC_2 530 553 IPR006553 -
Bisa05g1602 639 SMART LRR_CC_2 183 208 IPR006553 -
Bisa05g1602 639 SMART LRR_CC_2 360 383 IPR006553 -
Bisa05g1602 639 SMART LRR_CC_2 478 504 IPR006553 -
Bisa05g1602 639 SMART LRR_CC_2 420 444 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1602 Bisa-ChrBisa05 29381016 29386101 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1602 05 29381016 29386101 Bisa05g1602 05 29381016 29386101 CCT
Bisa05g1602 05 29381016 29386101 Bisa05g1602 05 29381016 29386101 ECH